Conservation of cofitness between PS417_04525 and PS417_05910 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04525 16S rRNA methyltransferase 1.0 PS417_05910 glucan biosynthesis protein D 0.24 16
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.99 PFLU_RS05970 glucan biosynthesis protein D low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.99 PFLU_RS05970 glucan biosynthesis protein D low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2953 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.92 Pf1N1B4_3022 Glucans biosynthesis protein D precursor low > 87
Pseudomonas sp. RS175 0.90 PFR28_03623 Ribosomal RNA small subunit methyltransferase C 0.87 PFR28_00341 Glucans biosynthesis protein D low > 88
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_14995 16S rRNA methyltransferase 0.89 AO353_04310 glucan biosynthesis protein D low > 101
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_06940 16S rRNA methyltransferase 0.88 AO356_06335 glucan biosynthesis protein D low > 104
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1616 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.91 PfGW456L13_4768 Glucans biosynthesis protein D precursor low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3247 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.87 Pf6N2E2_3135 Glucans biosynthesis protein D precursor low > 103
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase 0.80 Psyr_5085 Twin-arginine translocation pathway signal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase 0.80 Psyr_5085 Twin-arginine translocation pathway signal low > 86
Marinobacter adhaerens HP15 0.32 HP15_2266 rRNA (guanine-N(2)-)-methyltransferase 0.37 HP15_1934 periplasmic glucan biosynthesis protein MdoG low > 73
Shewanella sp. ANA-3 0.29 Shewana3_3447 16S rRNA m(2)G 1207 methyltransferase (RefSeq) 0.40 Shewana3_0889 mdoD glucan biosynthesis protein D (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.29 LU632_RS03750 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 LU632_RS08035 glucan biosynthesis protein D low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.63 GFF2612 Glucans biosynthesis protein D precursor low > 78
Pantoea sp. MT58 0.28 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.65 IAI47_06430 glucan biosynthesis protein low > 76
Shewanella oneidensis MR-1 0.28 SO0828 conserved hypothetical protein (NCBI ptt file) 0.40 SO1051 periplasmic glucan biosynthesis protein, putative (NCBI ptt file) low > 76
Escherichia coli BL21 0.28 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent 0.64 ECD_01381 OPG biosynthetic periplasmic protein low > 60
Escherichia coli BW25113 0.28 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) 0.65 b1424 mdoD glucan biosynthesis protein, periplasmic (RefSeq) low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.65 ECOLIN_RS08230 glucan biosynthesis protein OpgD — —
Escherichia coli ECRC99 0.27 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 KEDOAH_26795 opgD glucan biosynthesis protein OpgD — —
Escherichia coli ECOR38 0.27 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 HEPCGN_26170 opgD glucan biosynthesis protein OpgD 0.79 35
Escherichia coli ECRC98 0.27 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.63 JDDGAC_04135 opgD glucan biosynthesis protein OpgD — —
Escherichia fergusonii Becca 0.27 EFB2_04076 Ribosomal RNA small subunit methyltransferase C 0.65 EFB2_02556 Glucans biosynthesis protein D low > 86
Escherichia coli ECRC102 0.27 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 NIAGMN_25780 opgD glucan biosynthesis protein OpgD — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_3579 16S RNA G1207 methylase RsmC 0.65 EX28DRAFT_1233 Periplasmic glucans biosynthesis protein low > 76
Escherichia coli ECRC101 0.27 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 MCAODC_16290 opgD glucan biosynthesis protein OpgD — —
Escherichia coli ECOR27 0.27 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 NOLOHH_19325 opgD glucan biosynthesis protein OpgD low > 57
Escherichia coli ECRC101 0.27 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 OKFHMN_01645 opgD glucan biosynthesis protein OpgD — —
Klebsiella michiganensis M5al 0.27 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase 0.65 BWI76_RS13310 glucan biosynthesis protein D low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C 0.64 OHPLBJKB_02291 Glucans biosynthesis protein D low > 73
Escherichia coli ECRC62 0.27 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.64 BNILDI_17780 opgD glucan biosynthesis protein OpgD — —
Enterobacter sp. TBS_079 0.27 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C 0.64 MPMX20_02232 Glucans biosynthesis protein D low > 85
Rahnella sp. WP5 0.26 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.63 EX31_RS10890 glucan biosynthesis protein low > 89

Not shown: 12 genomes with orthologs for PS417_04525 only; 10 genomes with orthologs for PS417_05910 only