Conservation of cofitness between GFF3012 and GFF111 in Hydrogenophaga sp. GW460-11-11-14-LB1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3012 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) 1.0 GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD 0.47 20
Ralstonia solanacearum PSI07 0.66 RPSI07_RS21885 3-oxoacyl-ACP reductase FabG 0.46 RPSI07_RS21105 DNA ligase D low > 81
Variovorax sp. SCN45 0.62 GFF308 Oxidoreductase, short-chain dehydrogenase/reductase family 0.53 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD 0.36 76
Lysobacter sp. OAE881 0.61 ABIE51_RS01925 3-oxoacyl-ACP reductase FabG 0.28 ABIE51_RS12760 DNA ligase D low > 62
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.5082.1 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) 0.29 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 74
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS22225 3-ketoacyl-ACP reductase FabG2 0.47 ABZR87_RS08115 DNA ligase D low > 80
Paraburkholderia graminis OAS925 0.49 ABIE53_003199 3-oxoacyl-[acyl-carrier protein] reductase 0.44 ABIE53_002080 bifunctional non-homologous end joining protein LigD low > 113
Pseudomonas sp. S08-1 0.49 OH686_09970 3-oxoacyl-[ACP] reductase FadG2, NOT 0.45 OH686_01425 DNA ligase D low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_3703 3-oxoacyl-(acyl-carrier-protein) reductase, putative 0.47 Psest_2179 DNA ligase D low > 67
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS15135 3-ketoacyl-ACP reductase 0.44 BPHYT_RS09215 ATP-dependent DNA ligase low > 109
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS31190 3-ketoacyl-ACP reductase 0.47 RR42_RS37085 ATP-dependent DNA ligase low > 128
Pseudomonas sp. RS175 0.47 PFR28_05022 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.46 PFR28_02106 Multifunctional non-homologous end joining protein LigD low > 88
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS18540 3-ketoacyl-ACP reductase 0.38 HSERO_RS11360 DNA ligase low > 78
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0423 3-oxoacyl-(acyl-carrier-protein) reductase, putative 0.44 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0423 3-oxoacyl-(acyl-carrier-protein) reductase, putative 0.44 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1519 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) 0.45 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_09220 3-ketoacyl-ACP reductase 0.47 AO356_26950 ATP-dependent DNA ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3728 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) 0.46 Pf6N2E2_1216 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 103
Pseudomonas simiae WCS417 0.45 PS417_02035 3-ketoacyl-ACP reductase 0.45 PS417_13125 ATP-dependent DNA ligase low > 88
Pseudomonas fluorescens SBW25 0.44 PFLU_RS02080 3-oxoacyl-ACP reductase FabG 0.46 PFLU_RS14185 DNA ligase D low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS02080 3-oxoacyl-ACP reductase FabG 0.46 PFLU_RS14185 DNA ligase D low > 109
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS20540 3-oxoacyl-ACP reductase FabG 0.31 ABZR86_RS02935 DNA ligase D low > 74

Not shown: 36 genomes with orthologs for GFF3012 only; 10 genomes with orthologs for GFF111 only