Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF3012 | | 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) | 1.0 | GFF111 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | 0.47 | 20 |
Ralstonia solanacearum PSI07 | 0.66 | RPSI07_RS21885 | | 3-oxoacyl-ACP reductase FabG | 0.46 | RPSI07_RS21105 | | DNA ligase D | low | > 81 |
Variovorax sp. SCN45 | 0.62 | GFF308 | | Oxidoreductase, short-chain dehydrogenase/reductase family | 0.53 | GFF6242 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | 0.36 | 76 |
Lysobacter sp. OAE881 | 0.61 | ABIE51_RS01925 | | 3-oxoacyl-ACP reductase FabG | 0.28 | ABIE51_RS12760 | | DNA ligase D | low | > 62 |
Xanthomonas campestris pv. campestris strain 8004 | 0.60 | Xcc-8004.5082.1 | | 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) | 0.29 | Xcc-8004.2247.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | low | > 74 |
Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS22225 | | 3-ketoacyl-ACP reductase FabG2 | 0.47 | ABZR87_RS08115 | | DNA ligase D | low | > 80 |
Paraburkholderia graminis OAS925 | 0.49 | ABIE53_003199 | | 3-oxoacyl-[acyl-carrier protein] reductase | 0.44 | ABIE53_002080 | | bifunctional non-homologous end joining protein LigD | low | > 113 |
Pseudomonas sp. S08-1 | 0.49 | OH686_09970 | | 3-oxoacyl-[ACP] reductase FadG2, NOT | 0.45 | OH686_01425 | | DNA ligase D | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.48 | Psest_3703 | | 3-oxoacyl-(acyl-carrier-protein) reductase, putative | 0.47 | Psest_2179 | | DNA ligase D | low | > 67 |
Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS15135 | | 3-ketoacyl-ACP reductase | 0.44 | BPHYT_RS09215 | | ATP-dependent DNA ligase | low | > 109 |
Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS31190 | | 3-ketoacyl-ACP reductase | 0.47 | RR42_RS37085 | | ATP-dependent DNA ligase | low | > 128 |
Pseudomonas sp. RS175 | 0.47 | PFR28_05022 | | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | 0.46 | PFR28_02106 | | Multifunctional non-homologous end joining protein LigD | low | > 88 |
Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS18540 | | 3-ketoacyl-ACP reductase | 0.38 | HSERO_RS11360 | | DNA ligase | low | > 78 |
Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_0423 | | 3-oxoacyl-(acyl-carrier-protein) reductase, putative | 0.44 | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_0423 | | 3-oxoacyl-(acyl-carrier-protein) reductase, putative | 0.44 | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | low | > 86 |
Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_1519 | | 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) | 0.45 | Pf1N1B4_4314 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | low | > 87 |
Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_09220 | | 3-ketoacyl-ACP reductase | 0.47 | AO356_26950 | | ATP-dependent DNA ligase | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_3728 | | 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) | 0.46 | Pf6N2E2_1216 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | low | > 103 |
Pseudomonas simiae WCS417 | 0.45 | PS417_02035 | | 3-ketoacyl-ACP reductase | 0.45 | PS417_13125 | | ATP-dependent DNA ligase | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS02080 | | 3-oxoacyl-ACP reductase FabG | 0.46 | PFLU_RS14185 | | DNA ligase D | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS02080 | | 3-oxoacyl-ACP reductase FabG | 0.46 | PFLU_RS14185 | | DNA ligase D | low | > 109 |
Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS20540 | | 3-oxoacyl-ACP reductase FabG | 0.31 | ABZR86_RS02935 | | DNA ligase D | low | > 74 |
Not shown: 36 genomes with orthologs for GFF3012 only; 10 genomes with orthologs for GFF111 only