Conservation of cofitness between PS417_22115 and PS417_05570 in Pseudomonas simiae WCS417

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22115 transcriptional regulator 1.0 PS417_05570 DeoR faimly transcriptional regulator 0.22 14
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.31 20
Pseudomonas fluorescens SBW25 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.99 PFLU_RS05655 DeoR/GlpR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family 0.98 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family low > 87
Pseudomonas sp. RS175 0.96 PFR28_00572 HTH-type transcriptional regulator HexR 0.96 PFR28_03369 Glycerol-3-phosphate regulon repressor low > 88
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family 0.96 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family low > 103
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05165 transcriptional regulator 0.96 AO356_18245 DeoR family transcriptional regulator 0.59 1
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_03365 transcriptional regulator 0.94 AO353_04185 DeoR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family 0.97 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.91 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.91 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas putida KT2440 0.88 PP_1021 DNA-binding transcriptional regulator 0.91 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_0851 Transcriptional regulators 0.77 Psest_2774 Transcriptional regulators of sugar metabolism
Pseudomonas sp. S08-1 0.87 OH686_02440 Phosphogluconate repressor HexR, RpiR family 0.74 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.82 14
Marinobacter adhaerens HP15 0.61 HP15_2180 transcriptional regulator, RpiR family protein 0.51 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05825 transcriptional regulator HexR 0.57 CSW01_18830 DeoR/GlpR family transcriptional regulator low > 62
Serratia liquefaciens MT49 0.55 IAI46_14580 MurR/RpiR family transcriptional regulator 0.57 IAI46_23910 DeoR/GlpR family transcriptional regulator low > 86
Klebsiella michiganensis M5al 0.55 BWI76_RS18110 transcriptional regulator HexR 0.56 BWI76_RS26175 DeoR/GlpR family transcriptional regulator low > 92
Escherichia coli ECOR27 0.55 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR 0.57 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator low > 57
Escherichia coli ECRC102 0.55 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR 0.57 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC98 0.55 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR 0.57 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli Nissle 1917 0.55 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR 0.57 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator
Escherichia coli ECOR38 0.55 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR 0.57 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator low > 85
Escherichia fergusonii Becca 0.55 EFB2_02089 HTH-type transcriptional regulator HexR 0.57 EFB2_00406 Glycerol-3-phosphate regulon repressor low > 86
Escherichia coli ECRC62 0.55 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR 0.57 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC101 0.55 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR 0.57 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC99 0.55 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR 0.57 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC101 0.55 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR 0.57 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01875 HTH-type transcriptional regulator HexR 0.57 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF1632 Phosphogluconate repressor HexR, RpiR family 0.56 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family low > 78
Escherichia coli BW25113 0.55 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) 0.57 b3423 glpR DNA-binding transcriptional repressor (NCBI) low > 76
Dickeya dianthicola ME23 0.55 DZA65_RS10575 MurR/RpiR family transcriptional regulator 0.59 DZA65_RS20890 DeoR/GlpR family transcriptional regulator
Dickeya dianthicola 67-19 0.55 HGI48_RS10160 MurR/RpiR family transcriptional regulator 0.59 HGI48_RS19800 DeoR/GlpR family transcriptional regulator low > 71
Pectobacterium carotovorum WPP14 0.55 HER17_RS11785 MurR/RpiR family transcriptional regulator 0.60 HER17_RS01530 DeoR/GlpR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS10130 MurR/RpiR family transcriptional regulator 0.59 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator low > 74
Escherichia coli BL21 0.55 ECD_01824 putative DNA-binding transcriptional regulator 0.57 ECD_03274 DNA-binding transcriptional repressor low > 60
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0703 transcriptional regulator, RpiR family 0.56 EX28DRAFT_4123 transcriptional regulator, DeoR family low > 76
Rahnella sp. WP5 0.54 EX31_RS10635 MurR/RpiR family transcriptional regulator 0.56 EX31_RS04995 DeoR/GlpR family transcriptional regulator low > 89
Enterobacter sp. TBS_079 0.54 MPMX20_02758 HTH-type transcriptional regulator HexR 0.55 MPMX20_04306 Glycerol-3-phosphate regulon repressor low > 85
Alteromonas macleodii MIT1002 0.52 MIT1002_02408 putative HTH-type transcriptional regulator YbbH 0.53 MIT1002_00199 Glycerol-3-phosphate regulon repressor
Pantoea sp. MT58 0.50 IAI47_08490 MurR/RpiR family transcriptional regulator 0.56 IAI47_01765 DeoR/GlpR family transcriptional regulator low > 76
Erwinia tracheiphila SCR3 0.48 LU632_RS13365 MurR/RpiR family transcriptional regulator 0.58 LU632_RS23005 DeoR/GlpR family transcriptional regulator low > 74
Azospirillum sp. SherDot2 0.31 MPMX19_05117 HTH-type transcriptional regulator HexR 0.47 MPMX19_05965 Glycerol-3-phosphate regulon repressor low > 112

Not shown: 4 genomes with orthologs for PS417_22115 only; 31 genomes with orthologs for PS417_05570 only