Conservation of cofitness between EX31_RS22280 and EX31_RS18540 in Rahnella sp. WP5

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC 1.0 EX31_RS18540 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD 0.56 6
Serratia liquefaciens MT49 0.88 IAI46_05045 7-cyano-7-deazaguanine synthase QueC 0.71 IAI46_08535 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 86
Pantoea sp. MT58 0.83 IAI47_14620 7-cyano-7-deazaguanine synthase QueC 0.60 IAI47_12925 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 76
Escherichia coli ECOR27 0.83 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC 0.64 NOLOHH_22155 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli Nissle 1917 0.83 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC 0.64 ECOLIN_RS04720 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECOR38 0.83 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC 0.64 HEPCGN_22925 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia fergusonii Becca 0.83 EFB2_03613 7-cyano-7-deazaguanine synthase 0.64 EFB2_03174 ATP-binding/permease protein CydD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase 0.64 OHPLBJKB_02781 ATP-binding/permease protein CydD — —
Pectobacterium carotovorum WPP14 0.83 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC 0.70 HER17_RS12370 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 75
Dickeya dianthicola ME23 0.82 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC 0.71 DZA65_RS09905 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Dickeya dianthicola 67-19 0.82 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC 0.70 HGI48_RS09595 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli BL21 0.82 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis 0.64 ECD_00891 glutathione/cysteine ABC transporter export permease/ATPase — —
Escherichia coli BW25113 0.82 b0444 ybaX predicted aluminum resistance protein (NCBI) 0.64 b0887 cydD fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) — —
Dickeya dadantii 3937 0.82 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC 0.72 DDA3937_RS09580 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 74
Escherichia coli ECRC62 0.82 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC 0.64 BNILDI_20410 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC99 0.82 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC 0.64 KEDOAH_22150 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC101 0.82 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC 0.64 MCAODC_24975 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC100 0.82 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC 0.64 OKFHMN_05585 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC98 0.82 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC 0.64 JDDGAC_09395 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC102 0.82 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC 0.64 NIAGMN_03305 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Klebsiella michiganensis M5al 0.82 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC 0.65 BWI76_RS09640 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 92
Enterobacter sp. TBS_079 0.82 MPMX20_01035 7-cyano-7-deazaguanine synthase 0.66 MPMX20_01549 ATP-binding/permease protein CydD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4360 Queuosine Biosynthesis QueC ATPase 0.65 GFF4891 Transport ATP-binding protein CydD low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2526 queuosine biosynthesis protein QueC 0.66 EX28DRAFT_2045 thiol reductant ABC exporter, CydD subunit low > 76
Erwinia tracheiphila SCR3 0.80 LU632_RS18310 queC 7-cyano-7-deazaguanine synthase QueC 0.56 LU632_RS09725 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_06875 7-cyano-7-deazaguanine synthase QueC 0.56 CSW01_05980 thiol reductant ABC exporter subunit CydD — —
Shewanella amazonensis SB2B 0.68 Sama_1826 ExsB protein (RefSeq) 0.47 Sama_2679 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_2062 exsB protein (RefSeq) 0.53 Shew_0613 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO2503 exsB exsB protein (NCBI ptt file) 0.51 SO3780 cydD ABC transporter, ATP-binding protein CydD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.67 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) 0.52 Shewana3_0812 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.39 ABCV34_RS10950 7-cyano-7-deazaguanine synthase QueC 0.28 ABCV34_RS14385 thiol reductant ABC exporter subunit CydD low > 48
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.1450.1 Queuosine Biosynthesis QueC ATPase 0.24 Xcc-8004.2334.1 Transport ATP-binding protein CydD low > 74
Alteromonas macleodii MIT1002 0.26 MIT1002_01263 7-cyano-7-deazaguanine synthase 0.17 MIT1002_03846 ATP-binding/permease protein CydD low > 70
Marinobacter adhaerens HP15 0.23 HP15_3814 ExsB protein 0.29 HP15_1748 cysteine/glutathione ABC transporter membrane/ATP-binding component low > 73
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3209 queuosine biosynthesis protein QueC 0.16 Ga0059261_3825 thiol reductant ABC exporter, CydD subunit low > 68

Not shown: 59 genomes with orthologs for EX31_RS22280 only; 3 genomes with orthologs for EX31_RS18540 only