Conservation of cofitness between EX31_RS19675 and EX31_RS06170 in Rahnella sp. WP5

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS19675 TSUP family transporter 1.0 EX31_RS06170 D-ribose pyranase 0.38 1
Serratia liquefaciens MT49 0.79 IAI46_18015 TSUP family transporter 0.81 IAI46_25075 D-ribose pyranase low > 86
Enterobacter sp. TBS_079 0.76 MPMX20_03262 putative membrane transporter protein YfcA 0.73 MPMX20_04619 D-ribose pyranase low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0277 Predicted permeases 0.73 EX28DRAFT_4024 ABC-type ribose transport system, auxiliary component low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1948 Putative membrane protein YfcA 0.72 GFF1709 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) low > 78
Pantoea sp. MT58 0.75 IAI47_06160 TSUP family transporter 0.70 IAI47_00350 D-ribose pyranase low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS20425 hypothetical protein 0.73 BWI76_RS00270 D-ribose pyranase (EC 5.4.99.62) (from data) — —
Escherichia coli ECOR38 0.71 HEPCGN_21830 yfcA putative membrane transporter protein YfcA 0.72 HEPCGN_13460 rbsD D-ribose pyranase low > 87
Escherichia fergusonii Becca 0.71 EFB2_01531 putative membrane transporter protein YfcA 0.71 EFB2_04885 D-ribose pyranase low > 86
Escherichia coli ECRC101 0.71 MCAODC_13665 yfcA putative membrane transporter protein YfcA 0.72 MCAODC_05255 rbsD D-ribose pyranase low > 87
Escherichia coli ECRC99 0.71 KEDOAH_05570 yfcA putative membrane transporter protein YfcA 0.72 KEDOAH_13400 rbsD D-ribose pyranase — —
Escherichia coli BW25113 0.71 b2327 yfcA conserved inner membrane protein (NCBI) 0.72 b3748 rbsD D-ribose pyranase [EC:5.4.99.62] (from data) low > 76
Escherichia coli Nissle 1917 0.71 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein 0.72 ECOLIN_RS21550 D-ribose pyranase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01378 putative membrane transporter protein YfcA 0.72 OHPLBJKB_04305 D-ribose pyranase low > 73
Escherichia coli ECOR27 0.71 NOLOHH_14260 yfcA putative membrane transporter protein YfcA 0.72 NOLOHH_06885 rbsD D-ribose pyranase low > 75
Escherichia coli ECRC102 0.71 NIAGMN_20400 yfcA putative membrane transporter protein YfcA 0.72 NIAGMN_12505 rbsD D-ribose pyranase — —
Escherichia coli ECRC100 0.71 OKFHMN_22625 yfcA putative membrane transporter protein YfcA 0.72 OKFHMN_14750 rbsD D-ribose pyranase low > 80
Escherichia coli ECRC98 0.71 JDDGAC_26585 yfcA putative membrane transporter protein YfcA 0.72 JDDGAC_18370 rbsD D-ribose pyranase low > 86
Escherichia coli ECRC62 0.71 BNILDI_13180 yfcA putative membrane transporter protein YfcA 0.72 BNILDI_04640 rbsD D-ribose pyranase low > 75
Pectobacterium carotovorum WPP14 0.71 HER17_RS06945 sulfite exporter TauE/SafE family protein 0.79 HER17_RS21550 D-ribose pyranase low > 75
Dickeya dadantii 3937 0.69 DDA3937_RS14570 TSUP family transporter 0.77 DDA3937_RS00030 D-ribose pyranase low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS14520 TSUP family transporter 0.76 HGI48_RS21335 D-ribose pyranase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS15455 TSUP family transporter 0.76 DZA65_RS22315 D-ribose pyranase low > 75
Azospirillum sp. SherDot2 0.51 MPMX19_00682 putative membrane transporter protein YfcA 0.55 MPMX19_03757 D-ribose pyranase low > 112
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_12070 hypothetical protein 0.57 CSW01_14645 D-ribose pyranase low > 62
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_369 Putative membrane protein YfcA 0.50 PfGW456L13_3907 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) — —
Pseudomonas sp. RS175 0.31 PFR28_02189 putative membrane transporter protein YfcA 0.52 PFR28_02732 D-ribose pyranase low > 88
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4779 Membrane protein, putative 0.50 Pf1N1B4_6030 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_1267 Membrane protein, putative 0.52 Pf6N2E2_166 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_25900 hypothetical protein 0.52 AO356_00945 ribose pyranase — —
Pseudomonas simiae WCS417 0.30 PS417_12880 membrane protein 0.52 PS417_18380 ribose pyranase — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_26530 hypothetical protein 0.50 AO353_20840 ribose pyranase low > 101
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS13560 TSUP family transporter 0.51 PFLU_RS20355 D-ribose pyranase — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS13560 TSUP family transporter 0.51 PFLU_RS20355 D-ribose pyranase low > 109
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2454 Protein of unknown function DUF81 0.48 Psyr_2156 RbsD or FucU transport — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2454 Protein of unknown function DUF81 0.48 Psyr_2156 RbsD or FucU transport — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3324 FIG011065: hypothetical protein 0.47 Ac3H11_1838 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) — —
Pseudomonas putida KT2440 0.25 PP_0487 conserved membrane protein of unknown function 0.50 PP_2459 ribose pyranase low > 96
Variovorax sp. SCN45 0.24 GFF5022 FIG011065: hypothetical protein 0.46 GFF2135 D-ribose pyranase (EC 5.4.99.62) — —
Variovorax sp. OAS795 0.23 ABID97_RS04095 TSUP family transporter 0.48 ABID97_RS24780 D-ribose pyranase — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS23970 membrane protein 0.51 HSERO_RS11505 D-ribose pyranase low > 78

Not shown: 32 genomes with orthologs for EX31_RS19675 only; 1 genomes with orthologs for EX31_RS06170 only