Conservation of cofitness between EX28DRAFT_1764 and EX28DRAFT_4288 in Enterobacter asburiae PDN3

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid 1.0 EX28DRAFT_4288 ABC-type branched-chain amino acid transport system, permease component 0.50 19
Enterobacter sp. TBS_079 0.96 MPMX20_01853 DNA topoisomerase 3 0.99 MPMX20_04332 hypothetical protein low > 85
Escherichia coli BW25113 0.93 b1763 topB DNA topoisomerase III (NCBI) 0.90 b3456 livM leucine/isoleucine/valine transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_01969 DNA topoisomerase 3 0.90 OHPLBJKB_00247 hypothetical protein low > 73
Escherichia coli BL21 0.93 ECD_01732 DNA topoisomerase III 0.91 ECD_03305 branched-chain amino acid ABC transporter permease low > 61
Escherichia coli ECOR27 0.93 NOLOHH_17340 topB DNA topoisomerase III 0.90 NOLOHH_08545 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC62 0.93 BNILDI_16125 topB DNA topoisomerase III 0.90 BNILDI_02960 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC102 0.93 NIAGMN_01235 topB DNA topoisomerase III 0.91 NIAGMN_14520 livM branched chain amino acid ABC transporter permease LivM — —
Escherichia coli ECRC99 0.93 KEDOAH_01280 topB DNA topoisomerase III 0.91 KEDOAH_11390 livM branched chain amino acid ABC transporter permease LivM — —
Escherichia coli ECRC100 0.93 OKFHMN_26830 topB DNA topoisomerase III 0.91 OKFHMN_16750 livM branched chain amino acid ABC transporter permease LivM low > 80
Escherichia coli ECRC101 0.93 MCAODC_18580 topB DNA topoisomerase III 0.91 MCAODC_07280 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia coli ECRC98 0.93 JDDGAC_01405 topB DNA topoisomerase III 0.91 JDDGAC_20380 livM branched chain amino acid ABC transporter permease LivM low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS09830 DNA topoisomerase III 0.90 ECOLIN_RS19765 branched chain amino acid ABC transporter permease LivM — —
Escherichia fergusonii Becca 0.92 EFB2_02231 DNA topoisomerase 3 0.90 EFB2_00366 hypothetical protein low > 86
Escherichia coli ECOR38 0.92 HEPCGN_05200 topB DNA topoisomerase III 0.90 HEPCGN_15570 livM branched chain amino acid ABC transporter permease LivM low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3486 DNA topoisomerase III (EC 5.99.1.2) 0.93 GFF550 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) 0.56 4
Klebsiella michiganensis M5al 0.90 BWI76_RS11605 DNA topoisomerase III 0.93 BWI76_RS26340 branched-chain amino acid ABC transporter permease low > 92
Serratia liquefaciens MT49 0.84 IAI46_14305 DNA topoisomerase III 0.78 IAI46_00970 high-affinity branched-chain amino acid ABC transporter permease LivM low > 86
Rahnella sp. WP5 0.83 EX31_RS06315 DNA topoisomerase III 0.82 EX31_RS14795 high-affinity branched-chain amino acid ABC transporter permease LivM low > 89
Pectobacterium carotovorum WPP14 0.83 HER17_RS11095 DNA topoisomerase III 0.77 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS10300 DNA topoisomerase III 0.75 DDA3937_RS00670 high-affinity branched-chain amino acid ABC transporter permease LivM low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS10785 DNA topoisomerase III 0.75 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS10310 DNA topoisomerase III 0.75 HGI48_RS20720 high-affinity branched-chain amino acid ABC transporter permease LivM low > 71
Erwinia tracheiphila SCR3 0.79 LU632_RS12960 DNA topoisomerase III 0.80 LU632_RS19245 high-affinity branched-chain amino acid ABC transporter permease LivM low > 74
Pantoea sp. MT58 0.79 IAI47_08980 DNA topoisomerase III 0.78 IAI47_01575 high-affinity branched-chain amino acid ABC transporter permease LivM low > 76
Marinobacter adhaerens HP15 0.45 HP15_1186 DNA topoisomerase III 0.49 HP15_3057 leucine/isoleucine/valine transporter permease subunit low > 73
Pseudomonas putida KT2440 0.34 PP_4019 DNA topoisomerase III 0.56 PP_1139 branched chain amino acid transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00120 DNA topoisomerase III 0.55 AO356_05330 leucine/isoleucine/valine transporter permease subunit low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster 0.56 Pf6N2E2_2924 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) low > 103
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_1473 DNA topoisomerase III 0.56 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_1473 DNA topoisomerase III 0.56 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein low > 86
Pseudomonas fluorescens SBW25 0.33 PFLU_RS09715 DNA topoisomerase III 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS09715 DNA topoisomerase III 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid 0.55 Psest_1310 ABC-type branched-chain amino acid transport system, permease component low > 67
Pseudomonas simiae WCS417 0.32 PS417_10550 DNA topoisomerase III 0.54 PS417_06605 leucine/isoleucine/valine transporter permease subunit low > 88
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_26780 DNA topoisomerase III 0.55 AO353_17115 leucine/isoleucine/valine transporter permease subunit low > 101
Pseudomonas sp. RS175 0.32 PFR28_01342 DNA topoisomerase 3 0.56 PFR28_00538 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) 0.56 Pf1N1B4_3216 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 87
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_3568 DNA topoisomerase III (EC 5.99.1.2) 0.56 PfGW456L13_4609 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 87
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS24470 hypothetical protein 0.51 RR42_RS14415 leucine/isoleucine/valine transporter permease subunit low > 128

Not shown: 15 genomes with orthologs for EX28DRAFT_1764 only; 7 genomes with orthologs for EX28DRAFT_4288 only