| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_0090 | | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 1.0 | EX28DRAFT_3802 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | 0.69 | 10 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_03427 | | Membrane-bound lytic murein transglycosylase F | 0.88 | MPMX20_00192 | | Dipeptide transport system permease protein DppC | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF2461 | | Transglycosylase, Slt family | 0.86 | GFF477 | | Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) | low | > 78 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_20610 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | HEPCGN_14975 | dppC | dipeptide ABC transporter permease DppC | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_01149 | | Membrane-bound lytic murein transglycosylase F | 0.84 | OHPLBJKB_00164 | | Dipeptide transport system permease protein DppC | low | > 74 |
| Escherichia coli BW25113 | 0.77 | b2558 | mltF | predicted periplasmic binding protein/transglycosylase (RefSeq) | 0.84 | b3542 | dppC | dipeptide transporter (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.77 | EFB2_01338 | | Membrane-bound lytic murein transglycosylase F | 0.84 | EFB2_00265 | | Dipeptide transport system permease protein DppC | low | > 86 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_13140 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | NOLOHH_08055 | dppC | dipeptide ABC transporter permease DppC | low | > 76 |
| Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS14475 | | membrane-bound lytic murein transglycosylase MltF | 0.84 | ECOLIN_RS20265 | | dipeptide ABC transporter permease DppC | low | > 55 |
| Escherichia coli ECRC98 | 0.77 | JDDGAC_25130 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | JDDGAC_19740 | dppC | dipeptide ABC transporter permease DppC | low | > 87 |
| Escherichia coli ECRC101 | 0.77 | MCAODC_11995 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | MCAODC_06625 | dppC | dipeptide ABC transporter permease DppC | low | > 87 |
| Escherichia coli ECRC99 | 0.77 | KEDOAH_06755 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | KEDOAH_12040 | dppC | dipeptide ABC transporter permease DppC | — | — |
| Escherichia coli ECRC102 | 0.77 | NIAGMN_19235 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | NIAGMN_13870 | dppC | dipeptide ABC transporter permease DppC | low | > 80 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_11940 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | BNILDI_03505 | dppC | dipeptide ABC transporter permease DppC | low | > 75 |
| Escherichia coli ECRC100 | 0.77 | OKFHMN_21465 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.84 | OKFHMN_16110 | dppC | dipeptide ABC transporter permease DppC | low | > 79 |
| Klebsiella pneumoniae MKP103 | 0.75 | KDGMDA_28400 | | membrane-bound lytic murein transglycosylase MltF | 0.84 | KDGMDA_07600 | | dipeptide ABC transporter permease DppC | low | > 95 |
| Klebsiella michiganensis M5al | 0.74 | BWI76_RS21275 | | lytic transglycosylase F | 0.87 | BWI76_RS26875 | | dipeptide ABC transporter permease DppC | low | > 92 |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS15755 | | membrane-bound lytic murein transglycosylase MltF | 0.83 | HGI48_RS20915 | | dipeptide ABC transporter permease DppC | low | > 71 |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS16835 | | membrane-bound lytic murein transglycosylase MltF | 0.84 | DZA65_RS21910 | | dipeptide ABC transporter permease DppC | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS17980 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.78 | LU632_RS00275 | dppC | dipeptide ABC transporter permease DppC | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.58 | IJEDHG_02975 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.78 | IJEDHG_10090 | dppC | dipeptide ABC transporter permease DppC | low | > 61 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS15660 | | membrane-bound lytic murein transglycosylase MltF | 0.84 | DDA3937_RS00470 | | dipeptide ABC transporter permease DppC | low | > 74 |
| Pantoea sp. MT58 | 0.58 | IAI47_04925 | | membrane-bound lytic murein transglycosylase MltF | 0.77 | IAI47_18640 | | dipeptide ABC transporter permease DppC | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.58 | PagCFBP13505_RS14815 | | membrane-bound lytic murein transglycosylase MltF | 0.77 | PagCFBP13505_RS15675 | | dipeptide ABC transporter permease DppC | low | > 74 |
| Erwinia amylovora T8 | 0.57 | OLJFJH_10300 | | membrane-bound lytic murein transglycosylase MltF | 0.77 | OLJFJH_04865 | | dipeptide ABC transporter permease DppC | low | > 58 |
| Rahnella sp. WP5 | 0.57 | EX31_RS21890 | | membrane-bound lytic murein transglycosylase MltF | 0.77 | EX31_RS05505 | | dipeptide ABC transporter permease DppC | low | > 89 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_19480 | | membrane-bound lytic murein transglycosylase MltF | 0.81 | IAI46_00485 | | dipeptide ABC transporter permease DppC | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS05905 | | membrane-bound lytic murein transglycosylase MltF | 0.83 | HER17_RS00230 | | dipeptide ABC transporter permease DppC | 0.62 | 62 |
| Kangiella aquimarina DSM 16071 | 0.34 | B158DRAFT_2243 | | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 0.44 | B158DRAFT_1045 | | ABC-type antimicrobial peptide transport system, permease component | low | > 40 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_888 | | Transglycosylase, Slt family | 0.63 | Pf1N1B4_1125 | | Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) | low | > 87 |
| Marinobacter adhaerens HP15 | 0.30 | HP15_1238 | | transglycosylase, Slt family protein | 0.34 | HP15_202 | | oligopeptide/dipeptide ABC transporter, permease protein | low | > 73 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_03519 | | Membrane-bound lytic murein transglycosylase F | 0.63 | PFR28_00126 | | Dipeptide transport system permease protein DppC | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_17515 | | murein transglycosylase | 0.63 | AO356_07265 | | peptide transporter | low | > 104 |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS11520 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.60 | JOY50_RS10955 | | ABC transporter permease subunit | low | > 84 |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_4836 | | Transglycosylase, Slt family | 0.63 | PfGW456L13_5056 | | Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.30 | GFF1961 | | Membrane-bound lytic murein transglycosylase F | 0.63 | GFF5021 | | Dipeptide transport system permease protein DppC | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_04490 | | murein transglycosylase | 0.62 | AO353_05400 | | peptide transporter | low | > 101 |
| Pseudomonas putida KT2440 | 0.29 | PP_1036 | | membrane-bound lytic murein transglycosylase F | 0.60 | PP_0880 | | dipeptide ABC transporter - putative membrane subunit | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS24690 | | membrane-bound lytic murein transglycosylase MltF | 0.63 | PFLU_RS04095 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.29 | COO64_RS04690 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.62 | COO64_RS04095 | | ABC transporter permease subunit | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS24690 | | membrane-bound lytic murein transglycosylase MltF | 0.63 | PFLU_RS04095 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.29 | QF045_RS25235 | | membrane-bound lytic murein transglycosylase MltF | 0.63 | QF045_RS07050 | | ABC transporter permease subunit | low | > 93 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_23025 | | murein transglycosylase | 0.63 | PS417_04055 | | peptide transporter | low | > 88 |
| Pseudomonas sp. S08-1 | 0.28 | OH686_17625 | | Membrane-bound lytic murein transglycosylase F | 0.62 | OH686_08710 | | Dipeptide ABC transporter, permease protein DppC | low | > 80 |
| Pseudomonas aeruginosa PUPa3 | 0.28 | DQ20_RS42975 | mltF;go_component=membrane|0016020||IEA;go_function=lytic | membrane-bound lytic murein transglycosylase MltF | 0.60 | DQ20_RS56415 | | ABC transporter permease subunit | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.28 | DY961_RS14140 | mltF;go_component=membrane|0016020||IEA;go_function=lytic | membrane-bound lytic murein transglycosylase MltF | 0.60 | DY961_RS23950 | | ABC transporter permease subunit | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.28 | IKLFDK_19215 | | membrane-bound lytic murein transglycosylase MltF | 0.60 | IKLFDK_01560 | | Di/tripeptide transport system permease protein DppC | low | > 98 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_1268 | | extracellular solute-binding protein, family 3:SLT | 0.59 | Psyr_4240 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_1268 | | extracellular solute-binding protein, family 3:SLT | 0.59 | Psyr_4240 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas segetis P6 | 0.27 | MPMX49_01556 | | Membrane-bound lytic murein transglycosylase F | 0.63 | MPMX49_03888 | | Dipeptide transport system permease protein DppC | low | > 75 |
Not shown: 9 genomes with orthologs for EX28DRAFT_0090 only; 17 genomes with orthologs for EX28DRAFT_3802 only