Conservation of cofitness between EX28DRAFT_2079 and EX28DRAFT_2977 in Enterobacter asburiae PDN3

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_2079 type II secretion system protein D 1.0 EX28DRAFT_2977 agmatinase 0.60 10
Enterobacter sp. TBS_079 0.87 MPMX20_01515 Putative secretin GspD 1.00 MPMX20_03798 Agmatinase low > 85
Escherichia coli BW25113 0.54 b3325 yheF putative general protein secretion protein (VIMSS) 0.99 b2937 speB agmatinase (NCBI) low > 76
Escherichia coli Nissle 1917 0.54 ECOLIN_RS19060 type II secretion system secretin GspD 0.99 ECOLIN_RS16340 agmatinase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00378 Putative type II secretion system protein D 0.98 OHPLBJKB_00779 Agmatinase low > 73
Escherichia fergusonii Becca 0.53 EFB2_00498 Putative secretin GspD 0.99 EFB2_00964 Agmatinase low > 86
Klebsiella michiganensis M5al 0.51 BWI76_RS05090 type II secretion system protein GspD 0.99 BWI76_RS24025 agmatinase low > 92
Escherichia coli ECRC102 0.49 NIAGMN_28605 etpD variant type II secretion system secretin EtpD 0.99 NIAGMN_17080 speB agmatinase — —
Escherichia coli ECRC101 0.49 MCAODC_15265 etpD variant type II secretion system secretin EtpD 0.99 MCAODC_09835 speB agmatinase low > 87
Escherichia coli ECRC98 0.49 JDDGAC_30295 etpD variant type II secretion system secretin EtpD 0.99 JDDGAC_22945 speB agmatinase low > 86
Escherichia coli ECRC100 0.49 OKFHMN_00285 etpD variant type II secretion system secretin EtpD 0.99 OKFHMN_19315 speB agmatinase low > 80
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13790 type II secretion system protein GspD 0.63 CSW01_18230 agmatinase — —
Shewanella loihica PV-4 0.40 Shew_3619 general secretion pathway protein D (RefSeq) 0.65 Shew_1621 agmatinase (RefSeq) — —
Escherichia coli ECOR27 0.39 NOLOHH_10975 gspD general secretion pathway protein D 0.99 NOLOHH_11185 speB agmatinase low > 75
Escherichia coli BL21 0.39 ECD_02838 putative type II secretion protein GspD 0.99 ECD_02767 agmatinase low > 61
Escherichia coli ECOR38 0.39 HEPCGN_18050 gspD general secretion pathway protein D 0.99 HEPCGN_18620 speB agmatinase low > 87
Erwinia tracheiphila SCR3 0.34 LU632_RS25230 gspD type II secretion system secretin GspD 0.81 LU632_RS05515 speB agmatinase low > 74
Pseudomonas sp. S08-1 0.28 OH686_11840 type II secretion system protein D 0.31 OH686_11355 agmatinase low > 80
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_651 General secretion pathway protein D 0.30 Pf6N2E2_2655 Agmatinase (EC 3.5.3.11) low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_09345 type II secretion system protein GspD 0.30 AO356_04095 agmatinase low > 104
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS03450 type II secretion system secretin GspD 0.32 ABZR87_RS16040 agmatinase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1390 General secretion pathway protein D 0.29 GFF2044 Agmatinase (EC 3.5.3.11) low > 90
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_12545 type II secretion system protein GspD 0.30 AO353_18400 agmatinase low > 101
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.29 PFLU_RS22120 agmatinase low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.29 PFLU_RS22120 agmatinase low > 109
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_266 General secretion pathway protein D 0.50 PfGW456L13_2989 Agmatinase (EC 3.5.3.11) low > 87
Pseudomonas simiae WCS417 0.19 PS417_11295 general secretion pathway protein GspD 0.29 PS417_20180 agmatinase low > 88
Variovorax sp. OAS795 0.19 ABID97_RS06950 type II secretion system secretin GspD 0.30 ABID97_RS21560 agmatinase low > 91
Variovorax sp. SCN45 0.18 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.11 GFF3772 Arginase (EC 3.5.3.1) low > 127
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.942.1 hypothetical protein 0.10 Xcc-8004.4985.1 Arginase (EC 3.5.3.1) low > 74
Ralstonia solanacearum GMI1000 0.17 RS_RS15640 type II secretion system protein GspD 0.17 RS_RS24710 arginase low > 80
Ralstonia solanacearum PSI07 0.17 RPSI07_RS09520 type II secretion system protein GspD 0.16 RPSI07_RS07400 arginase low > 81
Ralstonia solanacearum UW163 0.17 UW163_RS05885 type II secretion system protein GspD 0.17 UW163_RS17040 arginase — —
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS07740 type II secretion system protein GspD 0.17 RALBFv3_RS16300 arginase low > 76
Pseudomonas putida KT2440 0.16 PP_1046 Type II secretion pathway protein XcpQ 0.49 PP_2196 agmatinase low > 96
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS19520 general secretion pathway protein GspD 0.30 RR42_RS02455 agmatinase low > 128
Pseudomonas sp. RS175 0.15 PFR28_01750 Secretin XcpQ 0.30 PFR28_00778 Guanidinobutyrase low > 88

Not shown: 17 genomes with orthologs for EX28DRAFT_2079 only; 29 genomes with orthologs for EX28DRAFT_2977 only