Conservation of cofitness between EX28DRAFT_3732 and EX28DRAFT_0729 in Enterobacter asburiae PDN3

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_3732 poly(A) polymerase 1.0 EX28DRAFT_0729 transcriptional regulator, IclR family 0.66 9
Enterobacter sp. TBS_079 0.89 MPMX20_00829 Poly(A) polymerase I 0.98 MPMX20_02734 Transcriptional regulator KdgR low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.95 GFF2842 Transcriptional regulator KdgR, KDG operon repressor low > 78
Escherichia fergusonii Becca 0.85 EFB2_03901 Poly(A) polymerase I 0.95 EFB2_02174 Transcriptional regulator KdgR low > 86
Escherichia coli BL21 0.85 ECD_00142 poly(A) polymerase 0.96 ECD_01798 KDG regulon transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03519 Poly(A) polymerase I 0.96 OHPLBJKB_01904 Transcriptional regulator KdgR low > 73
Escherichia coli ECRC99 0.85 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.96 KEDOAH_01625 kdgR DNA-binding transcriptional regulator KdgR — —
Escherichia coli ECRC100 0.85 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.96 OKFHMN_26480 kdgR DNA-binding transcriptional regulator KdgR low > 80
Escherichia coli Nissle 1917 0.85 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.95 ECOLIN_RS10175 DNA-binding transcriptional regulator KdgR — —
Escherichia coli BW25113 0.85 b0143 pcnB poly(A) polymerase I (VIMSS) 0.96 b1827 kdgR predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC98 0.85 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.96 JDDGAC_01055 kdgR DNA-binding transcriptional regulator KdgR low > 86
Escherichia coli ECOR38 0.85 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.95 HEPCGN_04880 kdgR DNA-binding transcriptional regulator KdgR low > 87
Escherichia coli ECRC102 0.85 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.96 NIAGMN_01580 kdgR DNA-binding transcriptional regulator KdgR — —
Escherichia coli ECRC101 0.85 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.96 MCAODC_18925 kdgR DNA-binding transcriptional regulator KdgR low > 87
Escherichia coli ECRC62 0.85 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.95 BNILDI_15785 kdgR DNA-binding transcriptional regulator KdgR low > 75
Klebsiella michiganensis M5al 0.82 BWI76_RS05005 polynucleotide adenylyltransferase 0.96 BWI76_RS17960 DNA-binding transcriptional regulator KdgR — —
Erwinia tracheiphila SCR3 0.78 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.80 LU632_RS13230 kdgR DNA-binding transcriptional regulator KdgR low > 74
Dickeya dadantii 3937 0.77 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.90 DDA3937_RS11445 DNA-binding transcriptional regulator KdgR low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.90 HGI48_RS11490 DNA-binding transcriptional regulator KdgR low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.90 DZA65_RS11830 DNA-binding transcriptional regulator KdgR low > 75
Pantoea sp. MT58 0.76 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.85 IAI47_08720 DNA-binding transcriptional regulator KdgR low > 76
Serratia liquefaciens MT49 0.76 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.81 IAI46_10820 DNA-binding transcriptional regulator KdgR low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.89 HER17_RS11535 DNA-binding transcriptional regulator KdgR low > 75
Alteromonas macleodii MIT1002 0.52 MIT1002_03692 Poly(A) polymerase I precursor 0.18 MIT1002_03303 Negative regulator of allantoin and glyoxylate utilization operons low > 70
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.13 ABZR86_RS01165 IclR family transcriptional regulator 0.55 13
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.21 Xcc-8004.484.1 Pca regulon regulatory protein PcaR low > 74
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0830 Poly(A) polymerase 0.24 Psyr_4014 regulatory protein, IclR low > 86
Pseudomonas putida KT2440 0.43 PP_4697 poly(A) polymerase 0.24 PP_1375 transcription regulatory protein (pca regulon) low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0830 Poly(A) polymerase 0.24 Psyr_4014 regulatory protein, IclR low > 86
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14395 poly(A) polymerase 0.24 AO353_17185 IclR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.25 Pf1N1B4_3230 Pca regulon regulatory protein PcaR low > 87
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.24 PfGW456L13_4594 Pca regulon regulatory protein PcaR low > 87
Pseudomonas sp. RS175 0.42 PFR28_03719 Poly(A) polymerase I 0.24 PFR28_00618 Pca regulon regulatory protein 0.29 86
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.24 PFLU_RS06715 IclR family transcriptional regulator 0.25 58
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.24 PFLU_RS06715 IclR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.42 PS417_23900 poly(A) polymerase 0.24 PS417_06690 IclR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.24 Pf6N2E2_2839 Pca regulon regulatory protein PcaR low > 103
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16070 poly(A) polymerase 0.50 AO356_28560 transcriptional regulator low > 104
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.19 Psest_3073 beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family low > 67
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.62 ABZR87_RS20805 DNA-binding transcriptional regulator KdgR low > 80
Variovorax sp. SCN45 0.33 GFF3943 Poly(A) polymerase (EC 2.7.7.19) 0.26 GFF3166 Transcriptional regulator, IclR family low > 127
Acinetobacter radioresistens SK82 0.30 MPMX26_00543 Poly(A) polymerase I 0.18 MPMX26_01897 hypothetical protein low > 36

Not shown: 17 genomes with orthologs for EX28DRAFT_3732 only; 17 genomes with orthologs for EX28DRAFT_0729 only