Conservation of cofitness between ECD_03500 and ECD_04260 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03500 ribonuclease PH 1.0 ECD_04260 purine nucleoside phosphorylase 1; nicotinamide 1-beta-D-riboside phosphorylase 0.58 5
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00059 Ribonuclease PH 1.00 OHPLBJKB_03677 Purine nucleoside phosphorylase DeoD-type low > 73
Escherichia coli ECRC62 1.00 BNILDI_04045 rph ribonuclease PH 1.00 BNILDI_08050 deoD purine-nucleoside phosphorylase low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20755 ribonuclease PH 1.00 ECOLIN_RS25165 purine-nucleoside phosphorylase low > 55
Escherichia fergusonii Becca 1.00 EFB2_00170 Ribonuclease PH 1.00 EFB2_04062 Purine nucleoside phosphorylase DeoD-type low > 86
Escherichia coli ECRC100 1.00 OKFHMN_15590 rph ribonuclease PH 1.00 OKFHMN_11215 deoD purine-nucleoside phosphorylase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_13350 rph ribonuclease PH 1.00 NIAGMN_09065 deoD purine-nucleoside phosphorylase — —
Escherichia coli ECOR38 1.00 HEPCGN_14410 rph ribonuclease PH 1.00 HEPCGN_09220 deoD purine-nucleoside phosphorylase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_07470 rph ribonuclease PH 1.00 NOLOHH_03545 deoD purine-nucleoside phosphorylase low > 75
Escherichia coli ECRC98 1.00 JDDGAC_19215 rph ribonuclease PH 1.00 JDDGAC_14810 deoD purine-nucleoside phosphorylase low > 86
Escherichia coli ECRC99 1.00 KEDOAH_12555 rph ribonuclease PH 1.00 KEDOAH_16935 deoD purine-nucleoside phosphorylase — —
Escherichia coli ECRC101 1.00 MCAODC_06100 rph ribonuclease PH 1.00 MCAODC_01730 deoD purine-nucleoside phosphorylase low > 87
Escherichia coli BW25113 0.93 b3643 rph ribonuclease PH (NCBI) 1.00 b4384 deoD purine nucleoside phosphorylase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.97 GFF1046 Purine nucleoside phosphorylase (EC 2.4.2.1) low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS27390 ribonuclease PH 0.94 BWI76_RS04145 purine-nucleoside phosphorylase low > 92
Enterobacter sp. TBS_079 0.92 MPMX20_00092 Ribonuclease PH 0.95 MPMX20_00683 Purine nucleoside phosphorylase DeoD-type low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3893 ribonuclease PH 0.94 EX28DRAFT_3593 purine-nucleoside phosphorylase, family 1 (deoD) low > 76
Dickeya dadantii 3937 0.89 DDA3937_RS20540 ribonuclease PH 0.92 DDA3937_RS03150 purine-nucleoside phosphorylase low > 74
Dickeya dianthicola ME23 0.88 DZA65_RS00730 ribonuclease PH 0.91 DZA65_RS03320 purine-nucleoside phosphorylase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS00675 ribonuclease PH 0.92 HGI48_RS03325 purine-nucleoside phosphorylase low > 71
Serratia liquefaciens MT49 0.87 IAI46_24850 ribonuclease PH 0.87 IAI46_02925 purine-nucleoside phosphorylase low > 86
Pantoea sp. MT58 0.87 IAI47_00595 ribonuclease PH 0.92 IAI47_03415 purine-nucleoside phosphorylase low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS22020 rph ribonuclease PH 0.89 LU632_RS02530 deoD purine-nucleoside phosphorylase low > 74
Rahnella sp. WP5 0.85 EX31_RS14505 ribonuclease PH 0.92 EX31_RS04050 purine-nucleoside phosphorylase low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS20855 ribonuclease PH 0.90 HER17_RS18120 purine-nucleoside phosphorylase low > 75
Shewanella amazonensis SB2B 0.77 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.72 Sama_0976 deoD purine nucleoside phosphorylase (RefSeq) low > 62
Shewanella loihica PV-4 0.77 Shew_3488 ribonuclease PH (RefSeq) 0.70 Shew_2812 deoD purine nucleoside phosphorylase (RefSeq) 0.72 5
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_01115 ribonuclease PH 0.79 CSW01_11895 purine-nucleoside phosphorylase low > 62
Shewanella oneidensis MR-1 0.76 SO4256 rph ribonuclease PH (NCBI ptt file) 0.71 SO1221 deoD-2 purine nucleoside phosphorylase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.76 Shewana3_3777 RNAse PH (RefSeq) 0.71 Shewana3_1044 deoD purine nucleoside phosphorylase (RefSeq) low > 73
Rhodanobacter denitrificans MT42 0.61 LRK55_RS11470 ribonuclease PH 0.46 LRK55_RS13660 purine-nucleoside phosphorylase low > 63
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS11745 ribonuclease PH 0.46 LRK54_RS13940 purine-nucleoside phosphorylase low > 59
Dinoroseobacter shibae DFL-12 0.58 Dshi_3463 ribonuclease PH (RefSeq) 0.46 Dshi_2858 purine nucleoside phosphorylase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.57 PGA1_c35030 ribonuclease PH 0.48 PGA1_c03820 purine nucleoside phosphorylase deoD-type low > 62

Not shown: 55 genomes with orthologs for ECD_03500 only; 1 genomes with orthologs for ECD_04260 only