Conservation of cofitness between ECD_03135 and ECD_04250 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03135 DUF494 family putative periplasmic protein 1.0 ECD_04250 peptide chain release factor RF-3 0.37 24
Escherichia coli BW25113 1.00 b3284 smg hypothetical protein (NCBI) 1.00 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00419 Protein Smg 1.00 OHPLBJKB_03687 Peptide chain release factor RF3 low > 73
Escherichia coli ECRC101 0.98 MCAODC_08070 smg DUF494 domain-containing protein 1.00 MCAODC_01795 prfC peptide chain release factor 3 low > 87
Escherichia coli ECRC62 0.98 BNILDI_02180 smg DUF494 domain-containing protein 1.00 BNILDI_08000 prfC peptide chain release factor 3 low > 75
Escherichia fergusonii Becca 0.98 EFB2_00539 Protein Smg 1.00 EFB2_04072 Peptide chain release factor RF3 low > 86
Escherichia coli ECRC99 0.98 KEDOAH_10600 smg DUF494 domain-containing protein 1.00 KEDOAH_16865 prfC peptide chain release factor 3 — —
Escherichia coli ECRC102 0.98 NIAGMN_15310 smg DUF494 domain-containing protein 1.00 NIAGMN_09130 prfC peptide chain release factor 3 — —
Escherichia coli ECRC98 0.98 JDDGAC_21170 smg DUF494 domain-containing protein 1.00 JDDGAC_14875 prfC peptide chain release factor 3 low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS18855 DUF494 family protein Smg 1.00 ECOLIN_RS25110 peptide chain release factor 3 low > 55
Escherichia coli ECRC100 0.98 OKFHMN_17550 smg DUF494 domain-containing protein 1.00 OKFHMN_11280 prfC peptide chain release factor 3 low > 80
Escherichia coli ECOR27 0.98 NOLOHH_09340 smg DUF494 domain-containing protein 1.00 NOLOHH_03600 prfC peptide chain release factor 3 low > 75
Escherichia coli ECOR38 0.97 HEPCGN_16370 smg DUF494 domain-containing protein 1.00 HEPCGN_09285 prfC peptide chain release factor 3 low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0043 Uncharacterized protein conserved in bacteria 0.95 EX28DRAFT_3583 peptide chain release factor 3 low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_04192 Protein Smg 0.95 MPMX20_00673 Peptide chain release factor RF3 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2394 Protein of unknown function Smg 0.97 GFF1035 Peptide chain release factor 3 low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS25660 hypothetical protein 0.97 BWI76_RS04100 peptide chain release factor 3 low > 92
Erwinia tracheiphila SCR3 0.86 LU632_RS22460 smg DUF494 family protein Smg 0.89 LU632_RS02475 prfC peptide chain release factor 3 0.68 45
Pantoea sp. MT58 0.85 IAI47_02300 DUF494 domain-containing protein 0.91 IAI47_03375 peptide chain release factor 3 low > 76
Serratia liquefaciens MT49 0.79 IAI46_23255 DUF494 domain-containing protein 0.91 IAI46_02875 peptide chain release factor 3 low > 86
Pectobacterium carotovorum WPP14 0.78 HER17_RS02235 DUF494 family protein 0.91 HER17_RS19065 peptide chain release factor 3 low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS19205 DUF494 domain-containing protein 0.91 HGI48_RS02400 peptide chain release factor 3 — —
Dickeya dianthicola ME23 0.76 DZA65_RS20330 DUF494 domain-containing protein 0.91 DZA65_RS02505 peptide chain release factor 3 low > 75
Rahnella sp. WP5 0.75 EX31_RS15965 DUF494 domain-containing protein 0.91 EX31_RS04095 peptide chain release factor 3 — —
Dickeya dadantii 3937 0.74 DDA3937_RS19115 DUF494 domain-containing protein 0.91 DDA3937_RS02445 peptide chain release factor 3 low > 74
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_00250 hypothetical protein 0.86 CSW01_03470 peptide chain release factor 3 low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_00023 hypothetical protein 0.82 MIT1002_01192 Peptide chain release factor 3 low > 70
Shewanella sp. ANA-3 0.59 Shewana3_0038 hypothetical protein (RefSeq) 0.79 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_3733 hypothetical protein (RefSeq) 0.79 Shew_2820 prfC peptide chain release factor 3 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.54 Sama_0046 hypothetical protein (RefSeq) 0.85 Sama_0968 prfC peptide chain release factor 3 (RefSeq) low > 62
Lysobacter sp. OAE881 0.40 ABIE51_RS02230 DUF494 family protein 0.66 ABIE51_RS16210 peptide chain release factor 3 — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4747.1 Protein of unknown function Smg 0.63 Xcc-8004.1590.1 Peptide chain release factor 3 — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0401 Uncharacterized protein conserved in bacteria 0.76 B158DRAFT_2239 peptide chain release factor 3 low > 40
Dechlorosoma suillum PS 0.29 Dsui_0820 hypothetical protein 0.60 Dsui_2418 peptide chain release factor 3 low > 51
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS23395 hypothetical protein 0.62 HSERO_RS14640 peptide chain release factor 3 low > 78
Castellaniella sp019104865 MT123 0.24 ABCV34_RS12300 DUF494 domain-containing protein 0.54 ABCV34_RS12505 peptide chain release factor 3 low > 48
Variovorax sp. SCN45 0.24 GFF5488 Protein of unknown function Smg 0.52 GFF2045 Peptide chain release factor 3 low > 127

Not shown: 2 genomes with orthologs for ECD_03135 only; 57 genomes with orthologs for ECD_04250 only