Conservation of cofitness between ECD_00354 and ECD_04099 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00354 tRNA-guanine transglycosylase 1.0 ECD_04099 putative sugar ABC transporter permease 0.65 6
Escherichia coli ECRC101 1.00 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 MCAODC_02455 yjfF sugar ABC transporter permease YjfF low > 87
Escherichia coli ECRC100 1.00 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 OKFHMN_11950 yjfF sugar ABC transporter permease YjfF low > 80
Escherichia coli ECOR27 1.00 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 NOLOHH_04210 yjfF sugar ABC transporter permease YjfF low > 75
Escherichia coli ECRC62 1.00 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 BNILDI_07305 yjfF sugar ABC transporter permease YjfF low > 75
Escherichia coli ECRC98 1.00 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 JDDGAC_15590 yjfF sugar ABC transporter permease YjfF low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.99 ECOLIN_RS24550 galactofuranose ABC transporter, permease protein YjfF
Escherichia coli BW25113 1.00 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 1.00 b4231 yjfF putative transport system permease protein (VIMSS) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 NIAGMN_09800 yjfF sugar ABC transporter permease YjfF
Escherichia fergusonii Becca 1.00 EFB2_03651 Queuine tRNA-ribosyltransferase 1.00 EFB2_04302 Inner membrane ABC transporter permease protein YjfF low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.99 OHPLBJKB_03804 Inner membrane ABC transporter permease protein YjfF low > 73
Escherichia coli ECOR38 1.00 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 HEPCGN_10150 yjfF sugar ABC transporter permease YjfF low > 87
Escherichia coli ECRC99 1.00 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 KEDOAH_16205 yjfF sugar ABC transporter permease YjfF
Enterobacter asburiae PDN3 0.98 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.96 EX28DRAFT_3416 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components low > 76
Enterobacter sp. TBS_079 0.98 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.96 MPMX20_00511 Inner membrane ABC transporter permease protein YjfF low > 85
Klebsiella michiganensis M5al 0.98 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.94 BWI76_RS02810 sugar ABC transporter permease YjfF
Pantoea sp. MT58 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.82 IAI47_10410 sugar ABC transporter permease YjfF low > 76
Dickeya dadantii 3937 0.92 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.90 DDA3937_RS16320 sugar ABC transporter permease YjfF low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.90 DZA65_RS17505 sugar ABC transporter permease YjfF low > 75
Pectobacterium carotovorum WPP14 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.66 HER17_RS01035 sugar ABC transporter permease YjfF low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.90 HGI48_RS16415 sugar ABC transporter permease YjfF low > 71
Rahnella sp. WP5 0.91 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.70 EX31_RS14965 sugar ABC transporter permease YjfF low > 89
Serratia liquefaciens MT49 0.91 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.66 IAI46_24390 sugar ABC transporter permease YjfF low > 86
Shewanella sp. ANA-3 0.85 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.45 Shewana3_2076 L-arabinose ABC transporter, permease component 2 AraZ (from data) low > 73
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.38 ABZR86_RS04110 galactofuranose ABC transporter, permease protein YjfF low > 74
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS06175 queuine tRNA-ribosyltransferase 0.36 HSERO_RS05185 ABC transporter permease low > 78
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 0.37 QEN71_RS09135 galactofuranose ABC transporter, permease protein YjfF low > 153
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04670 tRNA-guanine transglycosylase 0.39 H281DRAFT_05272 monosaccharide ABC transporter membrane protein, CUT2 family low > 103
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.37 ABZR87_RS18360 galactofuranose ABC transporter, permease protein YjfF low > 80
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.38 BPHYT_RS23885 ABC transporter permease low > 109
Acidovorax sp. GW101-3H11 0.57 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.44 Ac3H11_605 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) low > 79
Variovorax sp. OAS795 0.57 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.43 ABID97_RS06865 galactofuranose ABC transporter, permease protein YjfF low > 91
Variovorax sp. SCN45 0.57 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.43 GFF5199 Galactofuranose ABC transporter, permease protein 2 low > 127
Azospirillum brasilense Sp245 0.52 AZOBR_RS06295 queuine tRNA-ribosyltransferase 0.53 AZOBR_RS31200 sugar ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.52 MPMX19_01697 Queuine tRNA-ribosyltransferase 0.53 MPMX19_06215 Inner membrane ABC transporter permease protein YjfF low > 112
Sinorhizobium meliloti 1021 0.50 SMc01206 queuine tRNA-ribosyltransferase 0.56 SM_b21590 inner membrane ABC transporter permease YjfF low > 103
Rhizobium sp. OAE497 0.49 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt 0.56 ABIE40_RS09275 galactofuranose ABC transporter, permease protein YjfF low > 107
Agrobacterium fabrum C58 0.48 Atu1677 queuine tRNA-ribosyltransferase 0.55 Atu3225 ABC transporter permease low > 89

Not shown: 62 genomes with orthologs for ECD_00354 only; 1 genomes with orthologs for ECD_04099 only