Conservation of cofitness between ECD_01118 and ECD_03885 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 1.0 ECD_03885 homoserine O-transsuccinylase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02546 NAD-dependent protein deacylase 0.99 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECRC102 0.98 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.99 NIAGMN_11025 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC98 0.98 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.99 JDDGAC_16900 metA homoserine O-succinyltransferase low > 86
Escherichia coli ECOR38 0.98 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.99 HEPCGN_11915 metA homoserine O-succinyltransferase low > 87
Escherichia coli ECRC62 0.98 BNILDI_19130 cobB NAD-dependent protein deacylase 0.99 BNILDI_06100 metA homoserine O-succinyltransferase low > 75
Escherichia coli ECRC100 0.98 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.99 OKFHMN_13275 metA homoserine O-succinyltransferase low > 80
Escherichia coli ECRC99 0.98 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.99 KEDOAH_14885 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC101 0.98 MCAODC_22800 cobB NAD-dependent protein deacylase 0.99 MCAODC_03775 metA homoserine O-succinyltransferase low > 87
Escherichia coli ECOR27 0.98 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.99 NOLOHH_05420 metA homoserine O-succinyltransferase low > 75
Escherichia fergusonii Becca 0.98 EFB2_02855 NAD-dependent protein deacylase 1.00 EFB2_04597 Homoserine O-succinyltransferase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 1.00 ECOLIN_RS25515 homoserine O-succinyltransferase — —
Escherichia coli BW25113 0.87 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 1.00 b4013 metA homoserine O-succinyltransferase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.96 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.94 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01801 NAD-dependent protein deacylase 0.93 MPMX20_00230 Homoserine O-succinyltransferase low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS11230 NAD-dependent deacylase 0.94 BWI76_RS01655 homoserine O-succinyltransferase low > 92
Pantoea sp. MT58 0.75 IAI47_11950 NAD-dependent protein deacylase 0.85 IAI47_18015 homoserine O-succinyltransferase low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS08800 NAD-dependent protein deacylase 0.84 HER17_RS02285 homoserine O-succinyltransferase low > 75
Serratia liquefaciens MT49 0.72 IAI46_10355 NAD-dependent protein deacylase 0.83 IAI46_23200 homoserine O-succinyltransferase low > 86
Rahnella sp. WP5 0.72 EX31_RS24540 NAD-dependent protein deacylase 0.82 EX31_RS11735 homoserine O-succinyltransferase low > 89
Dickeya dianthicola ME23 0.71 DZA65_RS13510 NAD-dependent protein deacylase 0.83 DZA65_RS20275 homoserine O-succinyltransferase low > 75
Erwinia tracheiphila SCR3 0.70 LU632_RS14640 cobB NAD-dependent protein deacylase 0.86 LU632_RS22410 metA homoserine O-succinyltransferase low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS13045 NAD-dependent protein deacylase 0.83 HGI48_RS19155 homoserine O-succinyltransferase low > 71
Dickeya dadantii 3937 0.70 DDA3937_RS12975 NAD-dependent protein deacylase 0.83 DDA3937_RS19065 homoserine O-succinyltransferase low > 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_07575 NAD-dependent protein deacylase 0.66 CSW01_08100 homoserine O-succinyltransferase 0.41 60
Alteromonas macleodii MIT1002 0.51 MIT1002_02145 NAD-dependent protein deacylase 0.56 MIT1002_01112 Homoserine O-succinyltransferase low > 70
Shewanella loihica PV-4 0.48 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.57 Shew_2551 homoserine O-succinyltransferase (RefSeq) low > 60
Azospirillum brasilense Sp245 0.47 AZOBR_RS00620 NAD-dependent deacetylase 0.39 AZOBR_RS14010 homoserine O-succinyltransferase low > 97
Shewanella sp. ANA-3 0.47 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.56 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.46 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.57 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.55 24
Shewanella oneidensis MR-1 0.46 SO1938 cobB cobB protein (NCBI ptt file) 0.56 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) low > 76
Dinoroseobacter shibae DFL-12 0.35 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS12815 NAD-dependent deacylase 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase low > 61
Bifidobacterium breve UCC2003 0.16 BBR_RS20125 SIR2 family protein 0.42 BBR_RS11990 homoserine O-succinyltransferase low > 34
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS20510 NAD-dependent protein deacetylase 0.36 QEN71_RS42530 homoserine O-succinyltransferase low > 153

Not shown: 29 genomes with orthologs for ECD_01118 only; 10 genomes with orthologs for ECD_03885 only