Conservation of cofitness between ECD_02518 and ECD_02835 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02835 putative type II secretion protein GspG 0.55 36
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.61 OKFHMN_00270 gspG type II secretion system major pseudopilin GspG low > 80
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.61 NIAGMN_28590 gspG type II secretion system major pseudopilin GspG — —
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.61 JDDGAC_30310 gspG type II secretion system major pseudopilin GspG low > 86
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.61 MCAODC_15280 gspG type II secretion system major pseudopilin GspG low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 1.00 ECOLIN_RS17070 type II secretion system major pseudopilin GspG low > 55
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 1.00 EFB2_00848 Type II secretion system protein G low > 86
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NOLOHH_10990 gspG general secretion pathway protein G low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 1.00 OHPLBJKB_00742 Type II secretion system protein G low > 73
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 HEPCGN_18065 gspG general secretion pathway protein G low > 87
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.56 OH686_11775 type II secretion system protein G — —
Pseudomonas stutzeri RCH2 0.76 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.55 Psest_4200 general secretion pathway protein G low > 67
Pseudomonas sp. RS175 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT 0.48 PFR28_01746 Type II secretion system protein G low > 88
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.56 PP_1049 putative protein secretion protein for export low > 96
Pseudomonas fluorescens SBW25 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.48 PFLU_RS11870 type II secretion system protein GspG low > 109
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.49 Pf6N2E2_647 General secretion pathway protein G low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.49 AO356_24770 type II secretion system protein GspG low > 104
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.48 PFLU_RS11870 type II secretion system protein GspG low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.42 PfGW456L13_263 General secretion pathway protein G low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.43 AO353_12560 type II secretion system protein GspG low > 101
Pseudomonas simiae WCS417 0.73 PS417_00900 4-aminobutyrate aminotransferase 0.48 PS417_11275 general secretion pathway protein GspG low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.30 Psyr_3149 General secretion pathway protein G low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.30 Psyr_3149 General secretion pathway protein G low > 86
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.63 Sama_0172 general secretion pathway protein G (RefSeq) — —
Shewanella sp. ANA-3 0.66 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.66 Shewana3_0154 general secretion pathway protein G (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.66 SO0169 gspG general secretion pathway protein G (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.48 ABID97_RS06990 type II secretion system major pseudopilin GspG low > 91
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.47 Ac3H11_2038 General secretion pathway protein G low > 79
Shewanella loihica PV-4 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.67 Shew_3616 general secretion pathway protein G (RefSeq) — —
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.52 HP15_1604 general secretion pathway protein G low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.28 ABIE51_RS13610 type II secretion system major pseudopilin GspG low > 62

Not shown: 6 genomes with orthologs for ECD_02518 only; 30 genomes with orthologs for ECD_02835 only