Conservation of cofitness between ECD_04103 and ECD_02533 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase 1.0 ECD_02533 glycine betaine/proline ABC transporter periplasmic binding protein low > 61
Escherichia coli ECRC102 1.00 NIAGMN_09775 pmbA metalloprotease PmbA 1.00 NIAGMN_18590 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV — —
Escherichia coli ECOR38 1.00 HEPCGN_10125 pmbA metalloprotease PmbA 1.00 HEPCGN_20020 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 87
Escherichia coli ECRC62 1.00 BNILDI_07325 pmbA metalloprotease PmbA 1.00 BNILDI_11220 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 75
Escherichia coli ECRC100 1.00 OKFHMN_11925 pmbA metalloprotease PmbA 1.00 OKFHMN_20820 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 80
Escherichia coli BW25113 1.00 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) 1.00 b2677 proV glycine betaine transporter subunit (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_15565 pmbA metalloprotease PmbA 1.00 JDDGAC_24485 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 86
Escherichia coli ECOR27 1.00 NOLOHH_04185 pmbA metalloprotease PmbA 1.00 NOLOHH_12660 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 75
Escherichia coli ECRC101 1.00 MCAODC_02430 pmbA metalloprotease PmbA 1.00 MCAODC_11345 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 87
Escherichia coli ECRC99 1.00 KEDOAH_16230 pmbA metalloprotease PmbA 1.00 KEDOAH_07315 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03800 Metalloprotease PmbA 1.00 OHPLBJKB_01055 Glycine betaine/proline betaine transport system ATP-binding protein ProV low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24570 metalloprotease PmbA 1.00 ECOLIN_RS14930 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 55
Enterobacter sp. TBS_079 0.96 MPMX20_00517 Metalloprotease PmbA 0.95 MPMX20_03558 Glycine betaine/proline betaine transport system ATP-binding protein ProV low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF904 TldE protein, part of TldE/TldD proteolytic complex 0.95 GFF1587 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs 0.95 EX28DRAFT_2763 glycine betaine/L-proline transport ATP binding subunit low > 76
Klebsiella michiganensis M5al 0.94 BWI76_RS02850 metalloprotease PmbA 0.93 BWI76_RS22065 glycine betaine/L-proline ABC transporter ATP-binding protein low > 92
Serratia liquefaciens MT49 0.86 IAI46_22575 metalloprotease PmbA 0.83 IAI46_19950 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 86
Rahnella sp. WP5 0.85 EX31_RS12320 metalloprotease PmbA 0.83 EX31_RS13610 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS20090 metalloprotease PmbA 0.81 HER17_RS04505 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 75
Pantoea sp. MT58 0.84 IAI47_02765 metalloprotease PmbA 0.84 IAI47_04525 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS01500 metalloprotease PmbA 0.80 DDA3937_RS16720 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 74
Erwinia tracheiphila SCR3 0.81 LU632_RS02145 pmbA metalloprotease PmbA 0.83 LU632_RS16820 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01415 metalloprotease PmbA 0.80 HGI48_RS16800 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01480 metalloprotease PmbA 0.80 DZA65_RS17875 glycine betaine/L-proline ABC transporter ATP-binding protein ProV low > 75
Variovorax sp. SCN45 0.45 GFF4697 TldE protein, part of TldE/TldD proteolytic complex 0.59 GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) low > 127
Paraburkholderia graminis OAS925 0.43 ABIE53_003116 PmbA protein 0.45 ABIE53_006165 glycine betaine/proline transport system ATP-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04304 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 0.47 H281DRAFT_00987 glycine betaine/proline transport system ATP-binding protein — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04270 metalloprotease PmbA 0.46 QEN71_RS11070 glycine betaine/L-proline ABC transporter ATP-binding protein low > 153
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS14705 peptidase C69 0.46 BPHYT_RS25065 glycine/betaine ABC transporter ATPase low > 109
Castellaniella sp019104865 MT123 0.42 ABCV34_RS10610 metalloprotease PmbA 0.44 ABCV34_RS00890 glycine betaine/L-proline ABC transporter ATP-binding protein low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF3655 TldE protein, part of TldE/TldD proteolytic complex 0.57 GFF4105 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) low > 90
Ralstonia solanacearum GMI1000 0.41 RS_RS04700 metalloprotease PmbA 0.46 RS_RS17515 glycine betaine/L-proline ABC transporter ATP-binding protein low > 80
Azospirillum brasilense Sp245 0.34 AZOBR_RS11930 modulator protein 0.57 AZOBR_RS23480 glycine/betaine ABC transporter ATP-binding protein low > 97
Azospirillum sp. SherDot2 0.34 MPMX19_01886 Metalloprotease PmbA 0.53 MPMX19_04725 Glycine betaine/choline transport system ATP-binding protein OusV low > 112
Rhodospirillum rubrum S1H 0.29 Rru_A0575 Peptidase U62, modulator of DNA gyrase (NCBI) 0.57 Rru_A2475 Glycine betaine/L-proline transport ATP-binding subunit (NCBI) low > 58
Bacteroides thetaiotaomicron VPI-5482 0.20 BT3649 putative modulator of DNA gyrase (NCBI ptt file) 0.46 BT1751 Glycine betaine transport ATP-binding protein (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS03170 TldD/PmbA family protein 0.46 HMPREF1181_RS12815 glycine betaine/L-proline ABC transporter ATP-binding protein low > 56
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS03625 TldD/PmbA family protein 0.44 HMPREF1078_RS14335 glycine betaine/L-proline ABC transporter ATP-binding protein low > 61

Not shown: 51 genomes with orthologs for ECD_04103 only; 8 genomes with orthologs for ECD_02533 only