Conservation of cofitness between ECD_00267 and ECD_02519 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00267 choline dehydrogenase, a flavoprotein 1.0 ECD_02519 gamma-aminobutyrate transporter low > 61
Escherichia coli BW25113 1.00 b0311 betA choline dehydrogenase (NCBI) 1.00 b2663 gabP gamma-aminobutyrate transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03364 Oxygen-dependent choline dehydrogenase 1.00 OHPLBJKB_01069 GABA permease low > 73
Escherichia coli ECOR27 0.99 NOLOHH_01900 betA choline dehydrogenase 1.00 NOLOHH_12730 gabP GABA permease low > 75
Escherichia coli ECRC62 0.99 BNILDI_00025 betA choline dehydrogenase 1.00 BNILDI_11290 gabP GABA permease low > 75
Escherichia coli ECRC101 0.99 MCAODC_28275 betA choline dehydrogenase 1.00 MCAODC_11425 gabP GABA permease low > 87
Escherichia coli ECRC100 0.99 OKFHMN_09050 betA choline dehydrogenase 1.00 OKFHMN_20905 gabP GABA permease low > 80
Escherichia coli ECRC102 0.99 NIAGMN_07105 betA choline dehydrogenase 1.00 NIAGMN_18670 gabP GABA permease
Escherichia coli ECRC99 0.99 KEDOAH_18915 betA choline dehydrogenase 1.00 KEDOAH_07235 gabP GABA permease
Escherichia fergusonii Becca 0.99 EFB2_03724 Oxygen-dependent choline dehydrogenase 1.00 EFB2_01267 GABA permease low > 86
Escherichia coli ECRC98 0.99 JDDGAC_12700 betA choline dehydrogenase 1.00 JDDGAC_24565 gabP GABA permease low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02050 choline dehydrogenase 1.00 ECOLIN_RS14850 GABA permease
Escherichia coli ECOR38 0.98 HEPCGN_07610 betA choline dehydrogenase 1.00 HEPCGN_20160 gabP GABA permease low > 87
Pantoea sp. MT58 0.87 IAI47_08645 choline dehydrogenase 0.61 IAI47_19470 GABA permease low > 76
Pseudomonas sp. RS175 0.81 PFR28_04168 Oxygen-dependent choline dehydrogenase 0.62 PFR28_04595 GABA permease low > 88
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4732 choline dehydrogenase 0.66 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4732 choline dehydrogenase 0.66 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family low > 86
Pseudomonas putida KT2440 0.81 PP_5064 choline dehydrogenase 0.68 PP_2911 gamma-aminobutyrate permease low > 96
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) 0.62 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_13790 choline dehydrogenase 0.62 AO356_11625 GABA permease low > 104
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_1082 Choline dehydrogenase (EC 1.1.99.1) 0.64 PfGW456L13_375 transport permease protein of gamma-aminobutyrate low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_07810 choline dehydrogenase 0.64 AO353_12005 GABA permease low > 101
Pseudomonas simiae WCS417 0.80 PS417_26345 choline dehydrogenase 0.66 PS417_01505 gamma-aminobutyrate transporter low > 88
Pseudomonas fluorescens SBW25 0.80 PFLU_RS27995 choline dehydrogenase 0.65 PFLU_RS01545 GABA permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS27995 choline dehydrogenase 0.65 PFLU_RS01545 GABA permease low > 109
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_2416 Choline dehydrogenase (EC 1.1.99.1) 0.62 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate low > 87
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS08170 choline dehydrogenase 0.50 QEN71_RS31450 amino acid permease low > 153
Xanthomonas campestris pv. campestris strain 8004 0.79 Xcc-8004.964.1 Choline dehydrogenase (EC 1.1.99.1) 0.32 Xcc-8004.1650.1 amino acid transporter low > 74
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS25155 oxygen-dependent choline dehydrogenase 0.42 BPHYT_RS21680 amino acid permease-associated protein low > 109
Acinetobacter radioresistens SK82 0.78 MPMX26_02368 Oxygen-dependent choline dehydrogenase 0.51 MPMX26_01988 GABA permease low > 36
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02463 choline dehydrogenase 0.33 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family low > 103
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS29710 choline dehydrogenase 0.41 RR42_RS33780 GABA permease low > 128
Lysobacter sp. OAE881 0.35 ABIE51_RS16345 choline dehydrogenase 0.33 ABIE51_RS01430 amino acid permease low > 62
Mycobacterium tuberculosis H37Rv 0.26 Rv1279 Probable dehydrogenase FAD flavoprotein GMC oxidoreductase 0.37 Rv0522 Probable GABA permease GabP (4-amino butyrate transport carrier) (GAMA-aminobutyrate permease) low > 58

Not shown: 37 genomes with orthologs for ECD_00267 only; 1 genomes with orthologs for ECD_02519 only