Conservation of cofitness between ECD_01018 and ECD_01276 in Escherichia coli BL21

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01018 proline:sodium symporter 1.0 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.42 12
Escherichia coli ECRC62 1.00 BNILDI_19660 putP sodium/proline symporter PutP 1.00 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02651 Sodium/proline symporter 1.00 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR low > 73
Escherichia coli ECRC102 1.00 NIAGMN_23740 putP sodium/proline symporter PutP 1.00 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC99 1.00 KEDOAH_23150 putP sodium/proline symporter PutP 1.00 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC101 1.00 MCAODC_23980 putP sodium/proline symporter PutP 1.00 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECOR38 1.00 HEPCGN_23540 putP sodium/proline symporter PutP 1.00 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECRC100 1.00 OKFHMN_04595 putP sodium/proline symporter PutP 1.00 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR low > 80
Escherichia coli ECOR27 1.00 NOLOHH_21495 putP sodium/proline symporter PutP 1.00 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR low > 75
Escherichia coli ECRC98 1.00 JDDGAC_08205 putP sodium/proline symporter PutP 1.00 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR low > 86
Escherichia coli BW25113 1.00 b1015 putP proline:sodium symporter (NCBI) 1.00 b1299 puuR DNA-binding transcriptional repressor (NCBI) low > 76
Klebsiella michiganensis M5al 0.96 BWI76_RS10800 sodium:proline symporter 0.97 BWI76_RS10700 XRE family transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1910 sodium/proline symporter 0.97 EX28DRAFT_1500 Predicted transcriptional regulators low > 76
Pantoea sp. MT58 0.84 IAI47_08205 sodium/proline symporter PutP 0.71 IAI47_07115 HTH-type transcriptional regulator PuuR low > 76
Serratia liquefaciens MT49 0.81 IAI46_15740 sodium/proline symporter PutP 0.86 IAI46_10550 HTH-type transcriptional regulator PuuR low > 86
Rahnella sp. WP5 0.80 EX31_RS09415 sodium/proline symporter PutP 0.79 EX31_RS17905 HTH-type transcriptional regulator PuuR low > 89
Pseudomonas putida KT2440 0.76 PP_4946 sodium/L-proline transporter 0.37 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine low > 96
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_221 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.37 PfGW456L13_815 Putrescine utilization regulator low > 87
Pseudomonas simiae WCS417 0.76 PS417_02180 proline:sodium symporter PutP 0.36 PS417_27690 XRE family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_1487 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.36 Pf1N1B4_2147 Putrescine utilization regulator low > 87
Pseudomonas stutzeri RCH2 0.75 Psest_3075 sodium/proline symporter 0.40 Psest_3791 Predicted transcriptional regulators low > 67
Pseudomonas sp. S08-1 0.74 OH686_03775 sodium/proline symporter 0.37 OH686_13700 Putrescine utilization regulator low > 80
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0507 Na+/solute symporter 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0507 Na+/solute symporter 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12815 proline:sodium symporter PutP 0.37 AO353_09140 XRE family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_09010 proline:sodium symporter PutP 0.37 AO356_12635 XRE family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3684 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.37 Pf6N2E2_4394 Putrescine utilization regulator low > 103
Pseudomonas sp. RS175 0.73 PFR28_05054 Sodium/proline symporter 0.37 PFR28_04396 HTH-type transcriptional regulator PuuR low > 88
Shewanella loihica PV-4 0.50 Shew_2435 sodium/proline symporter (RefSeq) 0.38 Shew_0970 XRE family transcriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_2177 sodium/proline symporter (RefSeq) 0.36 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.28 44
Shewanella sp. ANA-3 0.49 Shewana3_1451 sodium/proline symporter (RefSeq) 0.39 Shewana3_3100 XRE family transcriptional regulator (RefSeq) low > 73
Fusobacterium nucleatum SB010 0.42 HUW76_00545 sodium/proline symporter PutP 0.18 HUW76_01135 cupin domain-containing protein low > 35
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_19440 sodium/proline symporter PutP 0.15 CSW01_15345 XRE family transcriptional regulator low > 62

Not shown: 16 genomes with orthologs for ECD_01018 only; 15 genomes with orthologs for ECD_01276 only