Conservation of cofitness between ECD_03444 and ECD_00904 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03444 L-threonine dehydrogenase 1.0 ECD_00904 LysR family putative transcriptional regulator low > 61
Escherichia coli ECRC62 1.00 BNILDI_03780 yiaY L-threonine dehydrogenase 0.99 BNILDI_20340 ycaN Uncharacterized HTH-type transcriptional regulator YcaN low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00114 Alcohol dehydrogenase 2 1.00 OHPLBJKB_02768 HTH-type transcriptional regulator PgrR low > 73
Escherichia coli BW25113 1.00 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 1.00 b0900 ycaN predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07750 yiaY L-threonine dehydrogenase 0.99 NOLOHH_22085 ycaN Uncharacterized HTH-type transcriptional regulator YcaN low > 75
Escherichia coli ECRC98 0.99 JDDGAC_19485 yiaY L-threonine dehydrogenase 0.34 JDDGAC_12800 lysR LysR family transcriptional regulator low > 86
Escherichia coli ECRC102 0.99 NIAGMN_13615 yiaY L-threonine dehydrogenase 0.34 NIAGMN_07215 lysR LysR family transcriptional regulator — —
Escherichia coli ECRC99 0.99 KEDOAH_12295 yiaY L-threonine dehydrogenase 0.34 KEDOAH_18800 lysR LysR family transcriptional regulator — —
Escherichia coli ECRC101 0.99 MCAODC_06370 yiaY L-threonine dehydrogenase 0.34 MCAODC_28375 lysR LysR family transcriptional regulator low > 87
Escherichia coli ECOR38 0.99 HEPCGN_14690 yiaY L-threonine dehydrogenase 0.98 HEPCGN_22995 ycaN Uncharacterized HTH-type transcriptional regulator YcaN low > 87
Escherichia coli ECRC100 0.99 OKFHMN_15855 yiaY L-threonine dehydrogenase 0.34 OKFHMN_09160 lysR LysR family transcriptional regulator low > 80
Serratia liquefaciens MT49 0.74 IAI46_19495 L-threonine dehydrogenase 0.40 IAI46_05810 LysR family transcriptional regulator low > 86
Rhodospirillum rubrum S1H 0.69 Rru_A0930 Iron-containing alcohol dehydrogenase (NCBI) 0.36 Rru_A1060 Transcriptional Regulator, LysR family (NCBI) low > 58
Pseudomonas simiae WCS417 0.69 PS417_06905 alcohol dehydrogenase 0.35 PS417_14680 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2802 Alcohol dehydrogenase (EC 1.1.1.1) 0.40 Pf6N2E2_1256 Transcriptional regulator, LysR family low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.36 Psyr_3051 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.36 Psyr_3051 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04765 lactaldehyde reductase 0.40 AO356_30455 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_17425 lactaldehyde reductase 0.38 AO353_14725 transcriptional regulator low > 101
Dickeya dadantii 3937 0.67 DDA3937_RS11900 L-threonine dehydrogenase 0.38 DDA3937_RS07650 LysR family transcriptional regulator low > 74
Pseudomonas sp. RS175 0.66 PFR28_00654 Alcohol dehydrogenase 2 0.37 PFR28_02573 HTH-type transcriptional regulator PgrR low > 88
Rahnella sp. WP5 0.59 EX31_RS00895 iron-containing alcohol dehydrogenase 0.35 EX31_RS21455 LysR family transcriptional regulator low > 89
Klebsiella michiganensis M5al 0.41 BWI76_RS00645 lactaldehyde reductase 0.37 BWI76_RS14820 LysR family transcriptional regulator low > 92
Ralstonia solanacearum UW163 0.28 UW163_RS21255 alcohol dehydrogenase 0.37 UW163_RS23075 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS17885 alcohol dehydrogenase 0.37 RALBFv3_RS22530 LysR family transcriptional regulator low > 76
Azospirillum brasilense Sp245 0.27 AZOBR_RS28580 alcohol dehydrogenase 0.40 AZOBR_RS27350 LysR family transcriptional regulator low > 97
Agrobacterium fabrum C58 0.26 Atu5138 gamma hydroxybutyrate dehydrogenase 0.41 Atu5241 LysR family transcriptional regulator — —
Paraburkholderia graminis OAS925 0.25 ABIE53_004445 alcohol dehydrogenase 0.37 ABIE53_001533 DNA-binding transcriptional LysR family regulator low > 113
Rhizobium sp. OAE497 0.25 ABIE40_RS12020 iron-containing alcohol dehydrogenase 0.40 ABIE40_RS23500 LysR family transcriptional regulator low > 107
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1) 0.33 Ac3H11_4132 Transcriptional regulator, LysR family low > 79
Sinorhizobium meliloti 1021 0.25 SMc01582 alcohol dehydrogenase 0.42 SMa1632 LysR family transcriptional regulator low > 103
Variovorax sp. SCN45 0.24 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.38 GFF3108 Transcriptional regulator, LysR family low > 127
Bosea sp. OAE506 0.24 ABIE41_RS11515 iron-containing alcohol dehydrogenase 0.36 ABIE41_RS18890 LysR family transcriptional regulator low > 77
Variovorax sp. OAS795 0.24 ABID97_RS15955 iron-containing alcohol dehydrogenase 0.38 ABID97_RS29120 LysR substrate-binding domain-containing protein low > 91
Ralstonia solanacearum PSI07 0.23 RPSI07_RS04360 4-hydroxybutyrate dehydrogenase 0.38 RPSI07_RS06585 LysR family transcriptional regulator low > 81
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS05010 iron-containing alcohol dehydrogenase 0.39 QEN71_RS13665 LysR family transcriptional regulator low > 153
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS12525 iron-containing alcohol dehydrogenase 0.38 ABZR87_RS22720 LysR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS11005 4-hydroxybutyrate dehydrogenase 0.38 RR42_RS33095 LysR family transcriptional regulator low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF4656 Alcohol dehydrogenase (EC 1.1.1.1) 0.23 GFF373 TcuR: regulates tcuABC genes used in utilization of tricarballylate low > 90

Not shown: 25 genomes with orthologs for ECD_03444 only; 9 genomes with orthologs for ECD_00904 only