Conservation of cofitness between ECD_03706 and ECD_00672 in Escherichia coli BL21

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03706 putative inner membrane EamA-like transporter 1.0 ECD_00672 putative allophanate hydrolase, subunit 2 low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS26230 biotin transporter 0.99 ECOLIN_RS03810 5-oxoprolinase subunit PxpC — —
Escherichia coli BW25113 1.00 b3827 yigM predicted inner membrane protein (NCBI) 1.00 b0712 ybgK predicted enzyme subunit (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_04810 Biotin transporter 0.99 EFB2_03391 5-oxoprolinase subunit C low > 86
Escherichia coli ECRC99 0.99 KEDOAH_13815 bioP biotin transporter 0.99 KEDOAH_20965 pxpC 5-oxoprolinase subunit PxpC — —
Escherichia coli ECRC100 0.99 OKFHMN_14335 bioP biotin transporter 0.99 OKFHMN_07000 pxpC 5-oxoprolinase subunit PxpC low > 80
Escherichia coli ECRC62 0.99 BNILDI_05065 bioP biotin transporter 0.99 BNILDI_21380 pxpC 5-oxoprolinase subunit PxpC low > 75
Escherichia coli ECRC102 0.99 NIAGMN_12090 bioP biotin transporter 0.99 NIAGMN_05055 pxpC 5-oxoprolinase subunit PxpC — —
Escherichia coli ECRC101 0.99 MCAODC_04840 bioP biotin transporter 0.99 MCAODC_26220 pxpC 5-oxoprolinase subunit PxpC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04224 hypothetical protein 1.00 OHPLBJKB_03005 putative protein YbgK low > 73
Escherichia coli ECOR38 0.99 HEPCGN_13035 bioP biotin transporter 0.99 HEPCGN_01210 pxpC 5-oxoprolinase subunit PxpC low > 87
Escherichia coli ECRC98 0.99 JDDGAC_17960 bioP biotin transporter 0.99 JDDGAC_10655 pxpC 5-oxoprolinase subunit PxpC low > 86
Escherichia coli ECOR27 0.99 NOLOHH_06465 bioP biotin transporter 0.99 NOLOHH_23385 pxpC 5-oxoprolinase subunit PxpC low > 75
Klebsiella michiganensis M5al 0.90 BWI76_RS01270 hypothetical protein 0.78 BWI76_RS08355 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_04453 Biotin transporter 0.77 MPMX20_01346 5-oxoprolinase subunit C low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_4492 Carboxylate/Amino Acid/Amine Transporter 0.78 EX28DRAFT_2275 biotin-dependent carboxylase uncharacterized domain low > 76
Rahnella sp. WP5 0.77 EX31_RS14725 DMT family transporter 0.67 EX31_RS23390 biotin-dependent carboxyltransferase family protein low > 89
Pantoea sp. MT58 0.74 IAI47_18325 DMT family transporter 0.65 IAI47_13800 biotin-dependent carboxyltransferase family protein low > 76
Serratia liquefaciens MT49 0.74 IAI46_01025 DMT family transporter 0.66 IAI46_06220 biotin-dependent carboxyltransferase family protein low > 86
Pectobacterium carotovorum WPP14 0.67 HER17_RS20695 carboxylate/amino acid/amine transporter 0.64 HER17_RS14980 biotin-dependent carboxyltransferase family protein 0.65 28
Dickeya dianthicola ME23 0.67 DZA65_RS00865 DMT family transporter 0.65 DZA65_RS06810 biotin-dependent carboxyltransferase family protein low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS00810 DMT family transporter 0.65 HGI48_RS06465 biotin-dependent carboxyltransferase family protein low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS22535 DMT family transporter 0.65 DDA3937_RS06420 biotin-dependent carboxyltransferase family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_00405 EamA family transporter 0.29 CSW01_18065 allophanate hydrolase low > 62
Alteromonas macleodii MIT1002 0.45 MIT1002_03265 carboxylate/amino acid/amine transporter 0.24 MIT1002_02296 KipI antagonist low > 70
Marinobacter adhaerens HP15 0.44 HP15_3914 carboxylate/amino acid/amine transporter 0.28 HP15_2687 urea amidolyase related protein low > 73
Pseudomonas stutzeri RCH2 0.43 Psest_1275 Carboxylate/Amino Acid/Amine Transporter 0.24 Psest_1540 biotin-dependent carboxylase uncharacterized domain low > 67
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2678 MadN protein 0.24 Pf6N2E2_2706 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_04220 hypothetical protein 0.31 AO356_07585 allophanate hydrolase low > 104
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18295 hypothetical protein 0.31 AO353_28800 allophanate hydrolase low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_545 MadN protein 0.23 Pf1N1B4_3368 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 87
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4455 MadN protein 0.24 PfGW456L13_4476 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 87
Pseudomonas sp. RS175 0.39 PFR28_00752 Biotin transporter 0.24 PFR28_00730 5-oxoprolinase subunit C low > 88
Pseudomonas putida KT2440 0.39 PP_4537 conserved membrane protein of unknown function 0.29 PP_2922 Urea amidolyase-related protein low > 96
Pseudomonas fluorescens SBW25 0.39 PFLU_RS22205 EamA family transporter 0.36 PFLU_RS19650 biotin-dependent carboxyltransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS22205 EamA family transporter 0.36 PFLU_RS19650 biotin-dependent carboxyltransferase family protein low > 109
Pseudomonas sp. S08-1 0.39 OH686_12480 MadN protein 0.26 OH686_08740 Allophanate hydrolase 2 subunit 2 low > 80
Pseudomonas simiae WCS417 0.38 PS417_20510 membrane protein 0.31 PS417_21900 allophanate hydrolase low > 88
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_3822 Protein of unknown function DUF6 0.30 Psyr_2720 Urea amidolyase-related protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_3822 Protein of unknown function DUF6 0.30 Psyr_2720 Urea amidolyase-related protein low > 86

Not shown: 1 genomes with orthologs for ECD_03706 only; 34 genomes with orthologs for ECD_00672 only