Conservation of cofitness between ECD_03116 and ECD_00415 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03116 pantothenate:sodium symporter 1.0 ECD_00415 transcriptional repressor 0.58 32
Escherichia coli ECRC99 1.00 KEDOAH_10455 panF sodium/pantothenate symporter 1.00 KEDOAH_19770 acrR multidrug efflux transporter transcriptional repressor AcrR — —
Escherichia coli ECRC62 1.00 BNILDI_02040 panF sodium/pantothenate symporter 1.00 BNILDI_22545 acrR multidrug efflux transporter transcriptional repressor AcrR low > 75
Escherichia coli ECRC100 1.00 OKFHMN_17695 panF sodium/pantothenate symporter 0.99 OKFHMN_08195 acrR multidrug efflux transporter transcriptional repressor AcrR low > 80
Escherichia coli ECRC101 1.00 MCAODC_08215 panF sodium/pantothenate symporter 1.00 MCAODC_27420 acrR multidrug efflux transporter transcriptional repressor AcrR 0.75 8
Escherichia coli BW25113 1.00 b3258 panF sodium/pantothenate symporter (VIMSS) 1.00 b0464 acrR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00447 Sodium/pantothenate symporter 1.00 OHPLBJKB_03210 HTH-type transcriptional regulator AcrR low > 73
Escherichia coli ECRC98 1.00 JDDGAC_21320 panF sodium/pantothenate symporter 1.00 JDDGAC_11845 acrR multidrug efflux transporter transcriptional repressor AcrR low > 86
Escherichia coli ECRC102 1.00 NIAGMN_15455 panF sodium/pantothenate symporter 0.99 NIAGMN_06250 acrR multidrug efflux transporter transcriptional repressor AcrR — —
Escherichia coli ECOR27 1.00 NOLOHH_09480 panF sodium/pantothenate symporter 1.00 NOLOHH_01130 acrR multidrug efflux transporter transcriptional repressor AcrR low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS18715 sodium/pantothenate symporter 1.00 ECOLIN_RS02760 multidrug efflux transporter transcriptional repressor AcrR low > 55
Escherichia coli ECOR38 0.99 HEPCGN_16515 panF sodium/pantothenate symporter 1.00 HEPCGN_06810 acrR multidrug efflux transporter transcriptional repressor AcrR low > 87
Escherichia fergusonii Becca 0.99 EFB2_00566 Sodium/pantothenate symporter 1.00 EFB2_03594 HTH-type transcriptional regulator AcrR low > 86
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3310 sodium/pantothenate symporter 0.83 EX28DRAFT_2494 transcriptional regulator, TetR family low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_04166 Sodium/pantothenate symporter 0.72 MPMX20_01066 HTH-type transcriptional regulator AcrR low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2126 Pantothenate:Na+ symporter (TC 2.A.21.1.1) 0.88 GFF4381 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS25550 sodium:pantothenate symporter 0.80 BWI76_RS06785 DNA-binding transcriptional repressor AcrR low > 92
Serratia liquefaciens MT49 0.82 IAI46_22765 sodium/pantothenate symporter 0.66 IAI46_05195 multidrug efflux transporter transcriptional repressor AcrR low > 86
Rahnella sp. WP5 0.81 EX31_RS12195 sodium/pantothenate symporter 0.59 EX31_RS22480 multidrug efflux transporter transcriptional repressor AcrR low > 89
Pantoea sp. MT58 0.77 IAI47_02395 sodium/pantothenate symporter 0.60 IAI47_14505 multidrug efflux transporter transcriptional repressor AcrR low > 76
Erwinia tracheiphila SCR3 0.75 LU632_RS21495 panF sodium/pantothenate symporter 0.59 LU632_RS18175 acrR multidrug efflux transporter transcriptional repressor AcrR low > 74
Dickeya dadantii 3937 0.74 DDA3937_RS01385 sodium/pantothenate symporter 0.59 DDA3937_RS05745 multidrug efflux transporter transcriptional repressor AcrR 0.56 22
Pectobacterium carotovorum WPP14 0.73 HER17_RS20220 sodium/pantothenate symporter 0.59 HER17_RS15730 multidrug efflux transporter transcriptional repressor AcrR low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS01305 sodium/pantothenate symporter 0.58 HGI48_RS05800 multidrug efflux transporter transcriptional repressor AcrR low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS01365 sodium/pantothenate symporter 0.59 DZA65_RS06125 multidrug efflux transporter transcriptional repressor AcrR low > 75
Dechlorosoma suillum PS 0.11 Dsui_0666 Na+/proline symporter 0.24 Dsui_1873 transcriptional regulator low > 51
Herbaspirillum seropedicae SmR1 0.10 HSERO_RS00960 sodium:solute symporter 0.34 HSERO_RS02420 TetR family transcriptional regulator — —
Variovorax sp. SCN45 0.09 GFF2546 sodium-solute symporter, putative 0.27 GFF3727 Transcriptional regulator, AcrR family low > 127
Ralstonia solanacearum GMI1000 0.09 RS_RS02295 sodium:solute symporter 0.29 RS_RS00055 TetR family transcriptional regulator low > 80
Acidovorax sp. GW101-3H11 0.09 Ac3H11_4798 sodium-solute symporter, putative 0.28 Ac3H11_4450 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 79
Ralstonia solanacearum IBSBF1503 0.09 RALBFv3_RS11465 sodium:solute symporter 0.29 RALBFv3_RS09455 TetR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.09 UW163_RS02120 sodium:solute symporter 0.29 UW163_RS04125 TetR family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.09 ABZR87_RS07425 sodium:solute symporter family protein 0.27 ABZR87_RS05305 TetR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.09 RPSI07_RS21745 sodium:solute symporter 0.29 RPSI07_RS23895 TetR family transcriptional regulator low > 81
Variovorax sp. OAS795 0.09 ABID97_RS07275 sodium:solute symporter family protein 0.29 ABID97_RS00315 TetR family transcriptional regulator low > 91
Cupriavidus basilensis FW507-4G11 0.09 RR42_RS02430 sodium:solute symporter 0.34 RR42_RS20640 TetR family transcriptional regulator low > 128
Paraburkholderia graminis OAS925 0.06 ABIE53_001413 SSS family solute:Na+ symporter 0.35 ABIE53_003410 TetR/AcrR family acrAB operon transcriptional repressor low > 113
Paraburkholderia bryophila 376MFSha3.1 0.06 H281DRAFT_02840 solute:Na+ symporter, SSS family 0.35 H281DRAFT_04172 transcriptional regulator, TetR family low > 103

Not shown: 7 genomes with orthologs for ECD_03116 only; 20 genomes with orthologs for ECD_00415 only