Conservation of cofitness between ECD_00617 and ECD_00280 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00617 ribonucleoside hydrolase 1 1.0 ECD_00280 broad specificity NADPH-dependent aldehyde reductase, Zn-containing 0.64 8
Escherichia coli BW25113 1.00 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.00 b0325 yahK predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NIAGMN_06980 yahK NADPH-dependent aldehyde reductase YahK — —
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OKFHMN_08925 yahK NADPH-dependent aldehyde reductase YahK — —
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 KEDOAH_19035 yahK NADPH-dependent aldehyde reductase YahK — —
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 JDDGAC_12580 yahK NADPH-dependent aldehyde reductase YahK — —
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 MCAODC_28155 yahK NADPH-dependent aldehyde reductase YahK — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NOLOHH_01805 yahK NADPH-dependent aldehyde reductase YahK low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 0.99 OHPLBJKB_03345 Aldehyde reductase YahK low > 73
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.99 HEPCGN_07515 yahK NADPH-dependent aldehyde reductase YahK low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 0.94 ECOLIN_RS02125 NADPH-dependent aldehyde reductase YahK low > 52
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 0.94 EFB2_03711 Aldehyde reductase YahK low > 86
Klebsiella michiganensis M5al 0.90 BWI76_RS13490 pyrimidine-specific ribonucleoside hydrolase RihA 0.44 BWI76_RS03320 alcohol dehydrogenase low > 92
Shewanella loihica PV-4 0.74 Shew_0697 rihA ribonucleoside hydrolase 1 (RefSeq) 0.47 Shew_3048 alcohol dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3476 rihA ribonucleoside hydrolase 1 (RefSeq) 0.49 Shewana3_1694 alcohol dehydrogenase (RefSeq) low > 73
Serratia liquefaciens MT49 0.62 IAI46_05975 pyrimidine-specific ribonucleoside hydrolase RihA 0.60 IAI46_22910 NAD(P)-dependent alcohol dehydrogenase low > 86
Sinorhizobium meliloti 1021 0.43 SMc01105 uridine nucleosidase (EC 3.2.2.3) (from data) 0.50 SMc00680 zinc-type alcohol dehydrogenase low > 103
Agrobacterium fabrum C58 0.40 Atu0374 inosine-uridine preferring nucleoside hydrolase 0.53 Atu1557 alcohol dehydrogenase low > 89
Rahnella sp. WP5 0.40 EX31_RS20270 nucleoside hydrolase 0.50 EX31_RS10950 NAD(P)-dependent alcohol dehydrogenase low > 89
Rhizobium sp. OAE497 0.39 ABIE40_RS01655 nucleoside hydrolase 0.48 ABIE40_RS11375 NAD(P)-dependent alcohol dehydrogenase low > 107
Pectobacterium carotovorum WPP14 0.37 HER17_RS00105 nucleoside hydrolase 0.77 HER17_RS02485 NAD(P)-dependent alcohol dehydrogenase low > 75
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.47 AO353_01250 hydroxyacid dehydrogenase low > 101
Variovorax sp. SCN45 0.34 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.65 GFF909 Alcohol dehydrogenase (EC 1.1.1.1) low > 127
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.48 Pf6N2E2_5980 Alcohol dehydrogenase (EC 1.1.1.1) low > 103
Ralstonia solanacearum GMI1000 0.34 RS_RS12775 nucleoside hydrolase 0.46 RS_RS22545 NAD(P)-dependent alcohol dehydrogenase low > 80
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.48 Pf1N1B4_395 Alcohol dehydrogenase (EC 1.1.1.1) low > 87
Ralstonia solanacearum PSI07 0.34 RPSI07_RS12145 nucleoside hydrolase 0.77 RPSI07_RS04195 NAD(P)-dependent alcohol dehydrogenase low > 81
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.48 AO356_20305 hydroxyacid dehydrogenase 0.19 58
Pseudomonas sp. RS175 0.33 PFR28_02731 Pyrimidine-specific ribonucleoside hydrolase RihB 0.48 PFR28_02982 NADP-dependent alcohol dehydrogenase C 2 low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.62 PFLU_RS11825 NAD(P)-dependent alcohol dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.62 PFLU_RS11825 NAD(P)-dependent alcohol dehydrogenase low > 109
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.62 PS417_11230 hydroxyacid dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.48 PfGW456L13_2132 Alcohol dehydrogenase (EC 1.1.1.1) low > 87
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.48 PP_2426 coniferyl alcohol dehydrogenase low > 96
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS15760 nucleoside hydrolase 0.49 A4249_RS00315 NAD(P)-dependent alcohol dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1203.1 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.62 Xcc-8004.38.1 Alcohol dehydrogenase (EC 1.1.1.1) low > 74
Mycobacterium tuberculosis H37Rv 0.21 Rv3393 Probable nucleoside hydrolase IunH (purine nucleosidase) 0.48 Rv3045 Probable NADP-dependent alcohol dehydrogenase AdhC low > 58

Not shown: 12 genomes with orthologs for ECD_00617 only; 27 genomes with orthologs for ECD_00280 only