| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_0695 | | putative ATPase of the PP-loop superfamily implicated in cell cycle control | 1.0 | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.40 | 9 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_02139 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.48 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | 0.42 | 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.62 | CSW01_07180 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.47 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_3033 | | Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | 0.46 | Psest_1767 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 67 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_05145 | | tRNA-(cytosine32)-2-thiocytidine synthetase TtcA | 0.48 | OH686_02845 | | Flagellar two-component response regulator FleR | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_02780 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.48 | AO353_18670 | | Fis family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_19000 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.45 | AO356_03845 | | Fis family transcriptional regulator | 0.31 | 9 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_03236 | | tRNA-cytidine(32) 2-sulfurtransferase | 0.47 | PFR28_00830 | | Regulatory protein AtoC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_5711 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.46 | Pf6N2E2_2595 | | Flagellar regulatory protein FleQ | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_3705 | | conserved hypothetical protein | 0.46 | Psyr_3459 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_3705 | | conserved hypothetical protein | 0.46 | Psyr_3459 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_16415 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.46 | PS417_19815 | | Fis family transcriptional regulator | — | — |
| Shewanella amazonensis SB2B | 0.58 | Sama_1801 | | hypothetical protein (RefSeq) | 0.46 | Sama_2299 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.47 | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.47 | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS22035 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.32 | HSERO_RS23170 | | ATPase AAA | low | > 78 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_2020 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.46 | PfGW456L13_4355 | | Flagellar regulatory protein FleQ | low | > 87 |
| Shewanella oneidensis MR-1 | 0.58 | SO2354 | | conserved hypothetical protein (NCBI ptt file) | 0.45 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | low | > 76 |
| Pseudomonas putida KT2440 | 0.58 | PP_1641 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.48 | PP_4371 | | two component system AtoC DNA-binding transcriptional activator | low | > 96 |
| Marinobacter adhaerens HP15 | 0.57 | HP15_2116 | | PP-loop domain protein | 0.44 | HP15_2328 | | two component, sigma54 specific, transcriptional regulator, Fis family | low | > 73 |
| Shewanella loihica PV-4 | 0.57 | Shew_1995 | | PP-loop domain-containing protein (RefSeq) | 0.46 | Shew_1364 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_2117 | | PP-loop domain-containing protein (RefSeq) | 0.45 | Shewana3_1340 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | low | > 73 |