Conservation of cofitness between CSW01_11715 and CSW01_19270 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11715 RNA polymerase subunit sigma 1.0 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.48 6
Variovorax sp. OAS795 0.32 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor 0.62 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase low > 91
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_13920 RNA polymerase subunit sigma 0.60 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase low > 53
Rhodopseudomonas palustris CGA009 0.29 TX73_002850 sigma-70 family RNA polymerase sigma factor 0.61 TX73_000140 3-deoxy-7-phosphoheptulonate synthase low > 86
Rhodanobacter denitrificans MT42 0.27 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor 0.61 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.48 44
Caulobacter crescentus NA1000 0.26 CCNA_00685 RNA polymerase sigma factor 0.61 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 66
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor 0.61 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase low > 59
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00685 RNA polymerase sigma factor 0.61 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 67
Variovorax sp. SCN45 0.22 GFF3817 RNA polymerase sigma factor 0.62 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) low > 127
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS21845 hypothetical protein 0.65 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase low > 109
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family 0.74 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) low > 76
Ralstonia solanacearum PSI07 0.19 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor 0.63 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase — —
Ralstonia solanacearum UW163 0.19 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor 0.63 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor 0.63 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase low > 76
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor 0.63 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor 0.77 PagCFBP13505_RS03695 3-deoxy-7-phosphoheptulonate synthase AroG low > 74
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.3601.1 RNA polymerase sigma-70 factor 0.61 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) low > 74
Synechococcus elongatus PCC 7942 0.18 Synpcc7942_2004 sigI RNA polymerase sigma factor 0.55 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase — —
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS15915 RNA polymerase subunit sigma-24 0.66 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF329 RNA polymerase sigma-54 factor RpoN 0.62 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 90
Pantoea sp. MT58 0.17 IAI47_19735 sigma-70 family RNA polymerase sigma factor 0.78 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG low > 76
Rahnella sp. WP5 0.16 EX31_RS18905 sigma-70 family RNA polymerase sigma factor 0.75 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG low > 89
Acidovorax sp. GW101-3H11 0.16 Ac3H11_1622 RNA polymerase sigma factor 0.63 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 79

Not shown: 25 genomes with orthologs for CSW01_11715 only; 40 genomes with orthologs for CSW01_19270 only