Conservation of cofitness between CSW01_00785 and CSW01_19120 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA 1.0 CSW01_19120 branched-chain amino acid ABC transporter permease 0.43 12
Shewanella loihica PV-4 0.67 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) 0.51 Shew_2538 AzlC family protein (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.67 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.41 HER17_RS03060 AzlC family ABC transporter permease low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.40 DDA3937_RS14525 AzlC family ABC transporter permease low > 74
Shewanella sp. ANA-3 0.65 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) 0.57 Shewana3_2694 AzlC family protein (RefSeq) low > 73
Klebsiella pneumoniae MKP103 0.65 KDGMDA_09400 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.26 KDGMDA_10265 branched-chain amino acid ABC transporter permease low > 95
Rahnella sp. WP5 0.65 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.13 EX31_RS13635 AzlC family ABC transporter permease low > 89
Shewanella oneidensis MR-1 0.65 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) 0.53 SO1760 AzlC family protein (NCBI ptt file) low > 76
Acinetobacter baumannii LAC-4 0.58 RR41_RS11900 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.41 RR41_RS05805 AzlC family ABC transporter permease low > 55
Pseudomonas segetis P6 0.51 ACVTMO_RS19815 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.33 ACVTMO_RS08585 AzlC family ABC transporter permease low > 75
Pseudomonas fluorescens SBW25 0.50 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.49 PFLU_RS14445 AzlC family ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.49 PFLU_RS14445 AzlC family ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_13905 tRNA (uracil-5-)-methyltransferase 0.46 AO353_28005 branched-chain amino acid ABC transporter permease low > 101
Pseudomonas stutzeri RCH2 0.50 Psest_3451 tRNA (uracil-5-)-methyltransferase 0.31 Psest_1529 Predicted branched-chain amino acid permease (azaleucine resistance) low > 67
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.16 Pf6N2E2_3869 Branched-chain amino acid transport protein AzlC low > 103
Pseudomonas simiae WCS417 0.49 PS417_24385 tRNA (uracil-5-)-methyltransferase 0.49 PS417_14155 branched-chain amino acid ABC transporter permease low > 88
Pseudomonas sp. RS175 0.49 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.47 PFR28_02267 hypothetical protein low > 88
Pseudomonas orientalis W4I3 0.49 QF045_RS26680 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.48 QF045_RS15795 AzlC family ABC transporter permease low > 93
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_15600 tRNA (uracil-5-)-methyltransferase 0.16 AO356_10005 branched-chain amino acid permease (azaleucine resistance) low > 104
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.46 PfGW456L13_3830 FIG00955248: hypothetical protein low > 87
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_05030 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.48 GEMAOFIL_02908 Inner membrane protein YgaZ low > 96
Pseudomonas sp. SVBP6 0.49 COO64_RS02860 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.45 COO64_RS07880 AzlC family ABC transporter permease low > 93
Dechlorosoma suillum PS 0.48 Dsui_2239 tRNA (uracil-5-)-methyltransferase 0.21 Dsui_0875 putative branched-chain amino acid permease (azaleucine resistance) low > 51
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 0.46 Pf1N1B4_5812 FIG00955248: hypothetical protein low > 87
Pseudomonas sp. DMC3 0.48 GFF3938 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.16 GFF4148 Inner membrane protein YgaZ low > 89
Pseudomonas sp. S08-1 0.48 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase 0.30 OH686_19615 AzlC protein low > 80
Pseudomonas putida KT2440 0.48 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.44 PP_2385 Branched-chain amino acid transport protein AzlC low > 96
Pseudomonas sp. BP01 0.48 JOY50_RS27500 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.44 JOY50_RS10650 AzlC family ABC transporter permease low > 84
Pseudomonas aeruginosa PUPa3 0.47 DQ20_RS52695 trmA;go_function=tRNA tRNA (uridine(54)-C5)-methyltransferase TrmA 0.49 DQ20_RS38700 AzlC family ABC transporter permease low > 101
Pseudomonas aeruginosa MRSN321 0.47 DY961_RS09335 trmA;go_function=S-adenosylmethionine-dependent tRNA (uridine(54)-C5)-methyltransferase TrmA 0.49 DY961_RS16375 AzlC family ABC transporter permease low > 100
Pseudomonas aeruginosa PA14 0.47 IKLFDK_30015 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.49 IKLFDK_09975 branched-chain amino acid ABC transporter permease low > 98

Not shown: 30 genomes with orthologs for CSW01_00785 only; 16 genomes with orthologs for CSW01_19120 only