Conservation of cofitness between CSW01_01710 and CSW01_18285 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01710 Rsd/AlgQ family anti-sigma factor 1.0 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase 0.67 1
Shewanella oneidensis MR-1 0.39 SO0433 rsd regulator of sigma D (NCBI ptt file) 0.64 SO1667 pterin-4-alpha-carbinolamine dehydratase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_0434 anti-RNA polymerase sigma 70 factor (RefSeq) 0.62 Shewana3_2780 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.37 Sama_0386 anti-RNA polymerase sigma 70 factor (RefSeq) 0.62 Sama_2221 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) low > 62
Shewanella loihica PV-4 0.36 Shew_3423 anti-RNA polymerase sigma 70 factor (RefSeq) 0.61 Shew_1436 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.30 HP15_221 anti-RNA polymerase sigma 70 factor 0.53 HP15_1336 pterin-4-alpha-carbinolamine dehydratase low > 73
Pseudomonas segetis P6 0.27 MPMX49_04516 Regulator of sigma D 0.57 MPMX49_02821 Putative pterin-4-alpha-carbinolamine dehydratase low > 75
Pseudomonas aeruginosa PA14 0.26 IKLFDK_27180 Alginate regulatory protein AlgQ 0.57 IKLFDK_03860 Pterin-4-alpha-carbinolamine dehydratase low > 98
Pseudomonas aeruginosa PUPa3 0.26 DQ20_RS49965 rsd;go_process=regulation sigma D regulator 0.57 DQ20_RS44685 4a-hydroxytetrahydrobiopterin dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.26 DY961_RS12155 rsd;go_process=regulation sigma D regulator 0.57 DY961_RS08125 4a-hydroxytetrahydrobiopterin dehydratase low > 100
Pseudomonas sp. S08-1 0.26 OH686_13925 Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD 0.51 OH686_21230 Pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas stutzeri RCH2 0.25 Psest_3743 Regulator of sigma D 0.49 Psest_0780 Pterin-4a-carbinolamine dehydratase — —
Pseudomonas sp. DMC3 0.25 GFF353 Regulator of sigma D 0.55 GFF2413 Putative pterin-4-alpha-carbinolamine dehydratase low > 89
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 0.54 Psyr_3576 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 0.54 Psyr_3576 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12810 transcriptional regulator 0.56 AO356_03980 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas sp. RS175 0.23 PFR28_04361 Regulator of sigma D 0.56 PFR28_00801 Putative pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_861 Regulator of sigma D 0.55 PfGW456L13_4395 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) — —
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_08965 transcriptional regulator 0.55 AO353_18580 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas sp. BP01 0.22 JOY50_RS18725 Rsd/AlgQ family anti-sigma factor 0.54 JOY50_RS01030 4a-hydroxytetrahydrobiopterin dehydratase low > 84
Pseudomonas putida KT2440 0.22 PP_0191 Transcriptional regulatory protein AlgQ 0.55 PP_4491 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_2190 Regulator of sigma D 0.55 Pf1N1B4_3565 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) — —
Pseudomonas orientalis W4I3 0.21 QF045_RS01865 sigma D regulator 0.55 QF045_RS22035 4a-hydroxytetrahydrobiopterin dehydratase — —
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_05639 Regulator of sigma D 0.55 GEMAOFIL_04179 Putative pterin-4-alpha-carbinolamine dehydratase low > 96
Pseudomonas simiae WCS417 0.21 PS417_27505 transcriptional regulator 0.55 PS417_19905 pterin-4-alpha-carbinolamine dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.55 PFLU_RS21875 4a-hydroxytetrahydrobiopterin dehydratase — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.55 PFLU_RS21875 4a-hydroxytetrahydrobiopterin dehydratase — —
Pseudomonas sp. SVBP6 0.20 COO64_RS01170 Rsd/AlgQ family anti-sigma factor 0.56 COO64_RS21665 4a-hydroxytetrahydrobiopterin dehydratase — —

Not shown: 31 genomes with orthologs for CSW01_01710 only; 14 genomes with orthologs for CSW01_18285 only