Conservation of cofitness between CSW01_03915 and CSW01_15560 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03915 Fe-S assembly protein IscX 1.0 CSW01_15560 lipocalin 0.42 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF2429 Believed to be involved in assembly of Fe-S clusters 0.51 GFF2000 Outer membrane lipoprotein Blc — —
Klebsiella michiganensis M5al 0.74 BWI76_RS21130 Fe-S assembly protein IscX 0.50 BWI76_RS17595 hypothetical protein low > 92
Escherichia coli Nissle 1917 0.73 ECOLIN_RS14335 Fe-S cluster assembly protein IscX 0.49 ECOLIN_RS24105 lipocalin Blc — —
Escherichia fergusonii Becca 0.73 EFB2_01366 Protein IscX 0.49 EFB2_04384 Outer membrane lipoprotein Blc low > 86
Serratia liquefaciens MT49 0.73 IAI46_19325 Fe-S cluster assembly protein IscX 0.53 IAI46_01530 outer membrane lipoprotein Blc low > 87
Escherichia coli BW25113 0.73 b2524 yfhJ hypothetical protein (NCBI) 0.50 b4149 blc outer membrane lipoprotein (lipocalin) (NCBI) — —
Escherichia coli ECRC102 0.73 NIAGMN_19420 iscX Fe-S cluster assembly protein IscX 0.50 NIAGMN_10215 blc lipocalin Blc low > 80
Escherichia coli ECRC101 0.73 MCAODC_12180 iscX Fe-S cluster assembly protein IscX 0.50 MCAODC_02880 blc lipocalin Blc — —
Escherichia coli ECRC62 0.73 BNILDI_12120 iscX Fe-S cluster assembly protein IscX 0.49 BNILDI_06860 blc lipocalin Blc low > 75
Escherichia coli ECRC100 0.73 OKFHMN_21650 iscX Fe-S cluster assembly protein IscX 0.50 OKFHMN_12370 blc lipocalin Blc low > 79
Escherichia coli ECOR27 0.73 NOLOHH_13320 iscX Fe-S cluster assembly protein IscX 0.50 NOLOHH_04630 blc lipocalin Blc 0.45 46
Escherichia coli ECRC99 0.73 KEDOAH_06570 iscX Fe-S cluster assembly protein IscX 0.50 KEDOAH_15795 blc lipocalin Blc — —
Escherichia coli ECRC98 0.73 JDDGAC_25325 iscX Fe-S cluster assembly protein IscX 0.50 JDDGAC_16005 blc lipocalin Blc — —
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS05815 Fe-S cluster assembly protein IscX 0.31 QEN71_RS25955 lipocalin family protein — —
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS12750 hypothetical protein 0.31 BPHYT_RS26170 lipocalin — —
Shewanella loihica PV-4 0.65 Shew_2311 hypothetical protein (RefSeq) 0.55 Shew_3085 Lipocalin family protein (RefSeq) — —
Pseudomonas stutzeri RCH2 0.62 Psest_1257 FeS assembly protein IscX 0.32 Psest_3953 Bacterial lipocalin — —
Shewanella oneidensis MR-1 0.62 SO2271 conserved hypothetical protein (NCBI ptt file) 0.74 SO1691 blc lipoprotein Blc (NCBI ptt file) — —
Pseudomonas sp. S08-1 0.60 OH686_17505 FeS assembly protein IscX 0.30 OH686_10275 Outer membrane lipoprotein Blc low > 80
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_15865 Fe-S assembly protein IscX 0.26 AO353_12230 lipocalin — —
Pseudomonas putida KT2440 0.58 PP_0848 donor of Fe2+ and regulator of cysteine desulfurase activity 0.30 PP_4032 putative Outer membrane lipoprotein Blc low > 96
Pseudomonas sp. BP01 0.58 JOY50_RS22790 iscX Fe-S cluster assembly protein IscX 0.30 JOY50_RS06645 lipocalin family protein low > 84
Acinetobacter radioresistens SK82 0.58 MPMX26_00424 Protein IscX 0.27 MPMX26_02141 Outer membrane lipoprotein Blc low > 36
Pseudomonas segetis P6 0.57 MPMX49_01513 Protein IscX 0.29 MPMX49_04273 Outer membrane lipoprotein Blc low > 75
Pseudomonas sp. RS175 0.57 PFR28_00292 Protein IscX 0.28 PFR28_04961 Outer membrane lipoprotein Blc low > 88
Pseudomonas sp. SVBP6 0.57 COO64_RS03925 iscX Fe-S cluster assembly protein IscX 0.30 COO64_RS13390 lipocalin family protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_859 Believed to be involved in assembly of Fe-S clusters 0.28 Pf1N1B4_1592 Outer membrane lipoprotein Blc — —
Pseudomonas aeruginosa PA14 0.56 IKLFDK_19610 Fe-S cluster assembly protein IscX 0.31 IKLFDK_27985 lipocalin — —
Pseudomonas aeruginosa MRSN321 0.56 DY961_RS13880 iscX;go_function=iron Fe-S cluster assembly protein IscX 0.30 DY961_RS11360 lipocalin family protein low > 100
Pseudomonas aeruginosa PUPa3 0.56 DQ20_RS43220 iscX;go_function=iron Fe-S cluster assembly protein IscX 0.31 DQ20_RS50735 lipocalin family protein low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4867 Believed to be involved in assembly of Fe-S clusters 0.29 PfGW456L13_331 Outer membrane lipoprotein Blc — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_06615 FeS assembly protein IscX 0.30 AO356_09650 lipocalin low > 104
Pseudomonas orientalis W4I3 0.47 QF045_RS25390 Fe-S cluster assembly protein IscX 0.28 QF045_RS04765 lipocalin family protein — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3183 Believed to be involved in assembly of Fe-S clusters 0.32 Pf6N2E2_3809 Outer membrane lipoprotein Blc low > 103
Pseudomonas sp. DMC3 0.45 GFF4344 Protein IscX 0.30 GFF4066 Outer membrane lipoprotein Blc — —
Pseudomonas simiae WCS417 0.44 PS417_23170 FeS assembly protein IscX 0.28 PS417_01700 lipocalin low > 88
Pseudomonas fluorescens SBW25 0.43 PFLU_RS24825 Fe-S cluster assembly protein IscX 0.28 PFLU_RS01755 lipocalin family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS24825 Fe-S cluster assembly protein IscX 0.28 PFLU_RS01755 lipocalin family protein low > 109

Not shown: 27 genomes with orthologs for CSW01_03915 only; 11 genomes with orthologs for CSW01_15560 only