Conservation of cofitness between CSW01_19345 and CSW01_14945 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19345 YccF domain-containing protein 1.0 CSW01_14945 2-hydroxyacid dehydrogenase 0.40 18
Shewanella oneidensis MR-1 0.64 SO1977 conserved hypothetical protein (NCBI ptt file) 0.64 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.63 Shewana3_2470 hypothetical protein (RefSeq) 0.65 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 73
Shewanella amazonensis SB2B 0.63 Sama_1575 hypothetical protein (RefSeq) 0.64 Sama_0612 D-lactate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.61 Shew_2148 hypothetical protein (RefSeq) 0.64 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 60
Serratia liquefaciens MT49 0.37 IAI46_08895 YccF domain-containing protein 0.65 IAI46_13355 2-hydroxyacid dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.37 HER17_RS08440 YccF domain-containing protein 0.61 HER17_RS09630 2-hydroxyacid dehydrogenase low > 75
Rahnella sp. WP5 0.36 EX31_RS18020 YccF domain-containing protein 0.63 EX31_RS06470 2-hydroxyacid dehydrogenase low > 89
Klebsiella pneumoniae MKP103 0.34 KDGMDA_18220 YccF domain-containing protein 0.65 KDGMDA_20645 D-lactate dehydrogenase low > 95
Erwinia amylovora T8 0.34 OLJFJH_15915 YccF domain-containing protein 0.61 OLJFJH_13790 2-hydroxyacid dehydrogenase low > 58
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS11245 YccF domain-containing protein 0.44 HMPREF1078_RS01675 2-hydroxyacid dehydrogenase low > 61
Enterobacter sp. TBS_079 0.34 MPMX20_01611 Inner membrane protein YccF 0.65 MPMX20_02132 D-lactate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1982 Predicted membrane protein 0.66 EX28DRAFT_1435 Lactate dehydrogenase and related dehydrogenases low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS09990 hypothetical protein 0.65 BWI76_RS12790 lactate dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3252 Inner membrane protein YccF 0.66 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) low > 78
Dickeya dadantii 3937 0.32 DDA3937_RS15225 YccF domain-containing protein 0.63 DDA3937_RS12295 2-hydroxyacid dehydrogenase low > 74
Escherichia coli BL21 0.31 ECD_00965 DUF307 family inner membrane protein 0.66 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent — —
Escherichia coli BW25113 0.31 b0961 yccF conserved inner membrane protein (NCBI) 0.65 b1380 ldhA D-lactate dehydrogenase (NCBI) low > 76
Escherichia coli ECOR27 0.31 NOLOHH_21770 yccF YccF domain-containing protein 0.65 NOLOHH_19530 ldhA D-lactate dehydrogenase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02705 Inner membrane protein YccF 0.66 OHPLBJKB_02331 D-lactate dehydrogenase low > 74
Escherichia coli ECOR38 0.31 HEPCGN_23305 yccF YccF domain-containing protein 0.65 HEPCGN_26050 ldhA D-lactate dehydrogenase low > 88
Escherichia fergusonii Becca 0.31 EFB2_03110 Inner membrane protein YccF 0.66 EFB2_02576 D-lactate dehydrogenase low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS05050 YccF domain-containing protein 0.66 ECOLIN_RS08110 D-lactate dehydrogenase low > 55
Escherichia coli ECRC62 0.31 BNILDI_19935 yccF YccF domain-containing protein 0.66 BNILDI_17985 ldhA D-lactate dehydrogenase low > 75
Escherichia coli ECRC98 0.31 JDDGAC_08825 yccF YccF domain-containing protein 0.66 JDDGAC_04285 ldhA D-lactate dehydrogenase low > 87
Escherichia coli ECRC102 0.31 NIAGMN_02935 yccF YccF domain-containing protein 0.66 NIAGMN_25930 ldhA D-lactate dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.31 BACOVA_05400 hypothetical protein 0.43 BACOVA_04316 4-phosphoerythronate dehydrogenase low > 96
Escherichia coli ECRC99 0.31 KEDOAH_22520 yccF YccF domain-containing protein 0.66 KEDOAH_26640 ldhA D-lactate dehydrogenase — —
Escherichia coli ECRC101 0.31 MCAODC_24605 yccF YccF domain-containing protein 0.66 MCAODC_16140 ldhA D-lactate dehydrogenase low > 88
Escherichia coli ECRC100 0.31 OKFHMN_05215 yccF YccF domain-containing protein 0.66 OKFHMN_01795 ldhA D-lactate dehydrogenase low > 79
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS13940 YccF domain-containing protein 0.44 HMPREF1181_RS11170 2-hydroxyacid dehydrogenase low > 56
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS11505 YccF domain-containing protein 0.40 ABI39_RS12465 2-hydroxyacid dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS15540 YccF domain-containing protein 0.40 HMPREF1058_RS16545 2-hydroxyacid dehydrogenase low > 67
Pantoea agglomerans CFBP13505 P0401 0.29 PagCFBP13505_RS04705 YccF domain-containing protein 0.64 PagCFBP13505_RS06660 2-hydroxyacid dehydrogenase low > 74
Pantoea sp. MT58 0.29 IAI47_12625 YccF domain-containing protein 0.62 IAI47_09495 2-hydroxyacid dehydrogenase low > 76
Bacteroides thetaiotaomicron VPI-5482 0.28 BT4608 conserved hypothetical protein (NCBI ptt file) 0.43 BT1575 putative dehydrogenase (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS22945 hypothetical protein 0.48 CA265_RS10420 hydroxyacid dehydrogenase low > 88

Not shown: 13 genomes with orthologs for CSW01_19345 only; 39 genomes with orthologs for CSW01_14945 only