Conservation of cofitness between CSW01_14050 and CSW01_13980 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14050 ribosomal RNA small subunit methyltransferase G 1.0 CSW01_13980 LysR family transcriptional regulator 0.80 2
Serratia liquefaciens MT49 0.67 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.45 IAI46_11235 LysR family transcriptional regulator low > 86
Rahnella sp. WP5 0.67 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.44 EX31_RS13835 LysR family transcriptional regulator low > 89
Pantoea sp. MT58 0.65 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.44 IAI47_10800 LysR family transcriptional regulator low > 76
Erwinia amylovora T8 0.65 OLJFJH_05315 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.43 OLJFJH_14515 DNA-binding transcriptional activator PunR low > 58
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS19040 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.44 PagCFBP13505_RS17790 LysR family transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.63 BWI76_RS00225 16S rRNA methyltransferase G 0.43 BWI76_RS16515 LysR family transcriptional regulator low > 92
Escherichia coli ECRC101 0.63 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 MCAODC_18030 punR DNA-binding transcriptional activator PunR low > 88
Escherichia coli ECRC102 0.63 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 NIAGMN_00685 punR DNA-binding transcriptional activator PunR low > 80
Escherichia coli ECOR27 0.63 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 NOLOHH_17900 punR DNA-binding transcriptional activator PunR low > 76
Escherichia coli BW25113 0.63 b3740 gidB glucose-inhibited division protein B (NCBI) 0.42 b1659 ydhB predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.63 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 BNILDI_16690 punR DNA-binding transcriptional activator PunR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.42 OHPLBJKB_02065 putative HTH-type transcriptional regulator YahB low > 74
Escherichia fergusonii Becca 0.63 EFB2_04893 Ribosomal RNA small subunit methyltransferase G 0.42 EFB2_02333 putative HTH-type transcriptional regulator YahB low > 86
Escherichia coli BL21 0.63 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.42 ECD_01630 LysR family putative transcriptional regulator low > 61
Escherichia coli ECRC100 0.63 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 OKFHMN_27380 punR DNA-binding transcriptional activator PunR low > 79
Escherichia coli Nissle 1917 0.63 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 ECOLIN_RS09250 DNA-binding transcriptional activator PunR low > 55
Escherichia coli ECRC98 0.63 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 JDDGAC_01970 punR DNA-binding transcriptional activator PunR low > 87
Escherichia coli ECRC99 0.63 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 KEDOAH_00730 punR DNA-binding transcriptional activator PunR — —
Enterobacter sp. TBS_079 0.62 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G 0.44 MPMX20_01977 putative HTH-type transcriptional regulator YahB low > 85
Enterobacter asburiae PDN3 0.62 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.43 EX28DRAFT_1656 Transcriptional regulator low > 76
Shewanella loihica PV-4 0.62 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) 0.50 Shew_2013 putative DNA-binding transcriptional regulator (RefSeq) low > 60
Escherichia coli ECOR38 0.62 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 HEPCGN_05765 punR DNA-binding transcriptional activator PunR low > 88
Klebsiella pneumoniae MKP103 0.62 KDGMDA_08835 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.43 KDGMDA_23475 DNA-binding transcriptional activator PunR low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.42 GFF3617 LysR-family transcriptional regulator YdhB low > 78
Shewanella sp. ANA-3 0.59 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) 0.52 Shewana3_2061 putative DNA-binding transcriptional regulator (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.59 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.41 LU632_RS11185 LysR family transcriptional regulator low > 74
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_09155 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.41 IJEDHG_25170 punR DNA-binding transcriptional activator PunR low > 61
Shewanella oneidensis MR-1 0.58 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) 0.51 SO2374 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.56 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) 0.52 Sama_1783 putative DNA-binding transcriptional regulator (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.15 AO353_28560 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.16 PfGW456L13_3137 Transcriptional regulator, LysR family low > 87
Pseudomonas sp. RS175 0.45 PFR28_04586 Ribosomal RNA small subunit methyltransferase G 0.15 PFR28_01506 putative HTH-type transcriptional regulator YahB low > 88
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.29 ABZR86_RS14560 LysR substrate-binding domain-containing protein low > 74
Pseudomonas sp. DMC3 0.43 GFF568 Ribosomal RNA small subunit methyltransferase G 0.17 GFF1218 putative HTH-type transcriptional regulator YahB low > 89
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.41 PFLU_RS08000 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.42 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.41 PFLU_RS08000 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.42 PS417_28515 16S rRNA methyltransferase 0.42 PS417_08030 transcriptional regulator low > 88
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_00173 Ribosomal RNA small subunit methyltransferase G 0.42 GEMAOFIL_01742 putative HTH-type transcriptional regulator YahB low > 93
Acinetobacter radioresistens SK82 0.38 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G 0.11 MPMX26_01916 HTH-type transcriptional activator AllS low > 36
Variovorax sp. OAS795 0.34 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.24 ABID97_RS29065 LysR family transcriptional regulator — —
Azospirillum sp. SherDot2 0.16 MPMX19_02570 Ribosomal RNA small subunit methyltransferase G 0.15 MPMX19_06778 HTH-type transcriptional regulator YhaJ — —

Not shown: 47 genomes with orthologs for CSW01_14050 only; 5 genomes with orthologs for CSW01_13980 only