Conservation of cofitness between CSW01_14595 and CSW01_10760 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14595 type VI secretion system ATPase TssH 1.0 CSW01_10760 glycine cleavage system transcriptional regulator 0.53 16
Dickeya dianthicola 67-19 0.59 HGI48_RS07990 type VI secretion system ATPase TssH 0.36 HGI48_RS06105 glycine cleavage system transcriptional repressor low > 71
Dickeya dadantii 3937 0.59 DDA3937_RS07060 type VI secretion system ATPase TssH 0.36 DDA3937_RS06060 glycine cleavage system transcriptional repressor low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS08585 type VI secretion system ATPase TssH 0.36 DZA65_RS06455 glycine cleavage system transcriptional repressor low > 75
Pectobacterium carotovorum WPP14 0.58 HER17_RS04885 type VI secretion system ATPase TssH 0.37 HER17_RS15420 glycine cleavage system transcriptional repressor low > 75
Escherichia coli ECRC99 0.56 KEDOAH_18250 tssH type VI secretion system ATPase TssH 0.39 KEDOAH_06310 gcvR glycine cleavage system transcriptional repressor — —
Escherichia coli ECRC102 0.56 NIAGMN_07750 tssH type VI secretion system ATPase TssH 0.39 NIAGMN_19680 gcvR glycine cleavage system transcriptional repressor low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03436 Protein ClpV1 0.39 OHPLBJKB_01250 Glycine cleavage system transcriptional repressor low > 74
Escherichia coli ECRC101 0.56 MCAODC_00420 tssH type VI secretion system ATPase TssH 0.39 MCAODC_12440 gcvR glycine cleavage system transcriptional repressor low > 87
Escherichia coli ECOR27 0.56 NOLOHH_02260 tssH type VI secretion system ATPase TssH 0.39 NOLOHH_13570 gcvR glycine cleavage system transcriptional repressor low > 76
Escherichia coli ECRC100 0.56 OKFHMN_09900 tssH type VI secretion system ATPase TssH 0.39 OKFHMN_21910 gcvR glycine cleavage system transcriptional repressor low > 79
Escherichia coli ECRC98 0.56 JDDGAC_13500 tssH type VI secretion system ATPase TssH 0.39 JDDGAC_25855 gcvR glycine cleavage system transcriptional repressor low > 87
Escherichia fergusonii Becca 0.55 EFB2_03820 Protein ClpV1 0.39 EFB2_01407 Glycine cleavage system transcriptional repressor low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS17705 tssH type VI secretion system ATPase TssH 0.37 LU632_RS08320 glycine cleavage system transcriptional repressor low > 73
Erwinia tracheiphila HP pepo 2.2 0.52 IJEDHG_02670 Type VI secretion system ATPase TssH 0.37 IJEDHG_18430 gcvR glycine cleavage system transcriptional repressor low > 61
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2088 ClpB protein 0.16 Pf1N1B4_3331 Glycine cleavage system transcriptional antiactivator GcvR low > 87
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09415 ClpV1 family T6SS ATPase 0.15 AO353_17665 glycine cleavage system protein R low > 101
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4303 ClpB protein 0.16 Pf6N2E2_2748 Glycine cleavage system transcriptional antiactivator GcvR low > 103
Pseudomonas aeruginosa PA14 0.42 IKLFDK_08005 ClpA/B-type protease 0.17 IKLFDK_04580 glycine cleavage system protein R low > 98
Pseudomonas aeruginosa PUPa3 0.41 DQ20_RS54070 tssH;go_component=type type VI secretion system ATPase TssH 0.17 DQ20_RS45355 glycine cleavage system protein R low > 101
Pseudomonas aeruginosa MRSN321 0.41 DY961_RS19975 tssH;go_component=type type VI secretion system ATPase TssH 0.17 DY961_RS07435 glycine cleavage system protein R low > 100
Pseudomonas segetis P6 0.40 MPMX49_00137 Protein ClpV1 0.16 MPMX49_01701 hypothetical protein low > 75
Pseudomonas sp. S08-1 0.40 OH686_12815 type VI secretion ATPase, ClpV1 family 0.15 OH686_19210 Glycine cleavage system transcriptional antiactivator GcvR low > 80
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_12155 ClpV1 family T6SS ATPase 0.16 AO356_04535 glycine cleavage system protein R low > 104
Pseudomonas stutzeri RCH2 0.40 Psest_0125 type VI secretion ATPase, ClpV1 family 0.16 Psest_1514 Glycine cleavage system regulatory protein low > 67
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS29660 type VI secretion system ATPase TssH 0.16 PFLU_RS07270 glycine cleavage system protein R low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS29660 type VI secretion system ATPase TssH 0.16 PFLU_RS07270 glycine cleavage system protein R low > 109
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.15 Psyr_1547 glycine cleavage system transcriptional repressor low > 86
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_00064 Protein ClpV1 0.17 GEMAOFIL_01580 Glycine cleavage system transcriptional repressor low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.15 Psyr_1547 glycine cleavage system transcriptional repressor low > 86
Pseudomonas orientalis W4I3 0.39 QF045_RS02335 type VI secretion system ATPase TssH 0.17 QF045_RS09870 glycine cleavage system protein R low > 93
Pseudomonas simiae WCS417 0.38 PS417_27980 ATPase AAA 0.17 PS417_07160 glycine cleavage system protein R low > 88
Enterobacter sp. TBS_079 0.38 MPMX20_01633 Protein ClpV1 0.37 MPMX20_03341 Glycine cleavage system transcriptional repressor low > 85
Erwinia amylovora T8 0.38 OLJFJH_03125 type VI secretion system ATPase TssH 0.34 OLJFJH_10630 glycine cleavage system transcriptional repressor low > 58
Pseudomonas putida KT2440 0.38 PP_3095 Protein ClpV1 0.17 PP_1236 putative Glycine cleavage system transcriptional repressor low > 96
Pseudomonas sp. BP01 0.38 JOY50_RS19890 tssH type VI secretion system ATPase TssH 0.17 JOY50_RS01715 glycine cleavage system protein R low > 84
Enterobacter asburiae PDN3 0.38 EX28DRAFT_0248 type VI secretion ATPase, ClpV1 family 0.37 EX28DRAFT_0181 Glycine cleavage system regulatory protein low > 76
Rahnella sp. WP5 0.38 EX31_RS01880 type VI secretion system ATPase TssH 0.39 EX31_RS22735 glycine cleavage system transcriptional repressor low > 89
Klebsiella pneumoniae MKP103 0.38 KDGMDA_20380 type VI secretion system ATPase TssH 0.37 KDGMDA_27750 glycine cleavage system transcriptional repressor low > 95
Pseudomonas sp. RS175 0.37 PFR28_04464 Protein ClpV1 0.16 PFR28_00698 Glycine cleavage system transcriptional repressor low > 88
Escherichia coli Nissle 1917 0.37 ECOLIN_RS15725 type VI secretion system ATPase TssH 0.39 ECOLIN_RS14150 glycine cleavage system transcriptional repressor low > 55
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS19825 type VI secretion system ATPase TssH 0.33 PagCFBP13505_RS15150 glycine cleavage system transcriptional repressor low > 74
Pseudomonas sp. SVBP6 0.36 COO64_RS00480 tssH type VI secretion system ATPase TssH 0.14 COO64_RS20240 glycine cleavage system protein R low > 93
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4054 ClpB protein 0.39 GFF2179 Glycine cleavage system transcriptional antiactivator GcvR low > 78
Serratia liquefaciens MT49 0.33 IAI46_05600 type VI secretion system ATPase TssH 0.36 IAI46_18785 glycine cleavage system transcriptional repressor low > 87

Not shown: 21 genomes with orthologs for CSW01_14595 only; 15 genomes with orthologs for CSW01_10760 only