| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09320 | | amino acid ABC transporter permease | 1.0 | CSW01_10320 | | chemotaxis protein CheA | 0.45 | 9 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_21265 | | Arginine/ornithine ABC transporter, permease protein AotM | 0.51 | OH686_02715 | | Signal transduction histidine kinase CheA | low | > 80 |
| Pseudomonas segetis P6 | 0.58 | ACVTMO_RS09295 | | ABC transporter permease | 0.49 | ACVTMO_RS15475 | | chemotaxis protein CheA | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.57 | PfGW456L13_1966 | | Arginine/ornithine ABC transporter, permease protein AotM | 0.37 | PfGW456L13_4328 | | Signal transduction histidine kinase CheA (EC 2.7.3.-) | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_03960 | | amino acid ABC transporter permease | 0.36 | IKLFDK_06935 | | two-component sensor | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.55 | DQ20_RS44780 | | ABC transporter permease | 0.36 | DQ20_RS47170 | | chemotaxis protein CheA | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.55 | DY961_RS08020 | | ABC transporter permease | 0.36 | DY961_RS05620 | | chemotaxis protein CheA | low | > 100 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_27980 | | amino acid ABC transporter permease | 0.50 | AO353_18800 | | chemotaxis protein CheA | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_4398 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | 0.51 | Pf1N1B4_3629 | | Signal transduction histidine kinase CheA (EC 2.7.3.-) | low | > 87 |
| Pseudomonas sp. BP01 | 0.54 | JOY50_RS00995 | | ABC transporter permease | 0.38 | JOY50_RS00570 | | chemotaxis protein CheA | low | > 84 |
| Pseudomonas putida KT2440 | 0.54 | PP_4484 | | histidine / lysine / arginine / ornithine ABC transporter - permease subunit | 0.38 | PP_4338 | | Chemotaxis histidine kinase CheA | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.53 | COO64_RS08405 | | ABC transporter permease | 0.38 | COO64_RS25640 | | chemotaxis protein CheA | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_04489 | | Octopine transport system permease protein OccM | 0.37 | GEMAOFIL_04135 | | hypothetical protein | low | > 96 |
| Marinobacter adhaerens HP15 | 0.53 | HP15_3033 | | amino acid ABC transporter, inner membrane subunit | 0.49 | HP15_2298 | | chemotaxis histidine kinase | low | > 73 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_3569 | | L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein | 0.37 | Psyr_3434 | | CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_3569 | | L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein | 0.37 | Psyr_3434 | | CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt | low | > 86 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_03286 | | Octopine transport system permease protein OccM | 0.53 | PFR28_00855 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_18710 | | L-Arginine ABC transporter, permease component 1 (from data) | 0.38 | AO356_03715 | | chemotaxis protein CheA | low | > 104 |
| Pseudomonas sp. DMC3 | 0.50 | GFF4884 | | Octopine transport system permease protein OccM | 0.37 | GFF2475 | | hypothetical protein | low | > 89 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_5662 | | L-Arginine ABC transporter, permease protein AotM (from data) | 0.38 | Pf6N2E2_2570 | | Signal transduction histidine kinase CheA (EC 2.7.3.-) | low | > 103 |
| Pseudomonas orientalis W4I3 | 0.49 | QF045_RS23840 | | ABC transporter permease | 0.50 | QF045_RS21820 | | chemotaxis protein CheA | low | > 93 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_21735 | | ABC transporter for L-Arginine, permease component 2 (from data) | 0.37 | PS417_19680 | | chemotaxis protein CheA | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS23340 | | ABC transporter permease | 0.37 | PFLU_RS21645 | | chemotaxis protein CheA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS23340 | | ABC transporter permease | 0.37 | PFLU_RS21645 | | chemotaxis protein CheA | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_0136 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | 0.50 | Psest_1743 | | Chemotaxis protein histidine kinase and related kinases | 0.34 | 55 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_0881 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | 0.53 | Shewana3_1362 | | CheA signal transduction histidine kinases (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.25 | SO1043 | | amino acid ABC transporter, permease protein (NCBI ptt file) | 0.53 | SO3207 | | chemotaxis protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.25 | Shew_3165 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | 0.54 | Shew_1386 | | CheA signal transduction histidine kinase (RefSeq) | low | > 60 |
Not shown: 48 genomes with orthologs for CSW01_09320 only; 3 genomes with orthologs for CSW01_10320 only