Conservation of cofitness between CSW01_01465 and CSW01_09750 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01465 ketohydroxyglutarate aldolase 1.0 CSW01_09750 molybdopterin guanine dinucleotide-containing S/N-oxide reductase 0.69 4
Pantoea sp. MT58 0.44 IAI47_08500 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.30 IAI47_16910 molybdopterin guanine dinucleotide-containing S/N-oxide reductase low > 76
Pantoea agglomerans CFBP13505 P0401 0.44 PagCFBP13505_RS02380 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.31 PagCFBP13505_RS09005 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C low > 74
Serratia liquefaciens MT49 0.44 IAI46_23180 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.48 IAI46_17255 trimethylamine-N-oxide reductase TorA low > 87
Enterobacter asburiae PDN3 0.44 EX28DRAFT_0706 Entner-Doudoroff aldolase 0.61 EX28DRAFT_3811 molybdopterin guanine dinucleotide-containing S/N-oxide reductases low > 76
Enterobacter sp. TBS_079 0.44 MPMX20_02755 KHG/KDPG aldolase 0.62 MPMX20_00183 Biotin sulfoxide reductase low > 85
Rahnella sp. WP5 0.43 EX31_RS10625 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.30 EX31_RS13235 molybdopterin-dependent oxidoreductase low > 89
Dickeya dianthicola ME23 0.43 DZA65_RS10585 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.27 DZA65_RS04560 molybdopterin-dependent oxidoreductase low > 75
Pectobacterium carotovorum WPP14 0.43 HER17_RS11775 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.27 HER17_RS16440 molybdopterin-dependent oxidoreductase low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS10170 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.28 HGI48_RS04640 molybdopterin-dependent oxidoreductase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF1629 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 0.62 GFF461 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) low > 78
Escherichia fergusonii Becca 0.40 EFB2_02093 KHG/KDPG aldolase 0.70 EFB2_02070 Trimethylamine-N-oxide reductase 2 low > 86
Escherichia coli ECRC100 0.40 OKFHMN_26345 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 OKFHMN_26210 torZ trimethylamine N-oxide reductase TorZ low > 79
Escherichia coli ECOR38 0.40 HEPCGN_04750 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 HEPCGN_04625 torZ trimethylamine N-oxide reductase TorZ low > 88
Escherichia coli Nissle 1917 0.40 ECOLIN_RS10305 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 ECOLIN_RS10705 trimethylamine N-oxide reductase TorZ — —
Escherichia coli BL21 0.40 ECD_01821 KHG/KDPG aldolase; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase 0.70 ECD_01843 trimethylamine N-oxide reductase system III, catalytic subunit — —
Escherichia coli ECRC62 0.40 BNILDI_15650 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 BNILDI_15445 torZ trimethylamine N-oxide reductase TorZ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01879 KHG/KDPG aldolase 0.70 OHPLBJKB_01856 Trimethylamine-N-oxide reductase 2 low > 74
Escherichia coli BW25113 0.40 b1850 eda keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) 0.70 b1872 bisZ biotin sulfoxide reductase 2 (VIMSS) low > 76
Escherichia coli ECRC102 0.40 NIAGMN_01715 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 NIAGMN_01850 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli ECRC98 0.40 JDDGAC_00920 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 JDDGAC_00785 torZ trimethylamine N-oxide reductase TorZ low > 87
Escherichia coli ECRC99 0.40 KEDOAH_01760 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 KEDOAH_01895 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli ECRC101 0.40 MCAODC_19060 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 MCAODC_19195 torZ trimethylamine N-oxide reductase TorZ low > 87
Escherichia coli ECOR27 0.39 NOLOHH_16855 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.70 NOLOHH_16655 torZ trimethylamine N-oxide reductase TorZ low > 76
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS05525 ketohydroxyglutarate aldolase 0.09 HSERO_RS19290 molybdopterin oxidoreductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF5496 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 0.07 GFF400 Anaerobic dehydrogenases, typically selenocysteine-containing — —
Klebsiella pneumoniae MKP103 0.38 KDGMDA_25360 keto-deoxy-phosphogluconate aldolase 0.62 KDGMDA_07660 trimethylamine-N-oxide reductase TorA low > 95
Klebsiella michiganensis M5al 0.38 BWI76_RS18095 ketohydroxyglutarate aldolase 0.62 BWI76_RS26930 biotin sulfoxide reductase — —
Variovorax sp. SCN45 0.37 GFF6512 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 0.08 GFF5001 Oxidoreductase, molybdopterin-binding low > 127
Xanthobacter sp. DMC5 0.36 GFF237 KHG/KDPG aldolase 0.07 GFF1751 Dimethyl sulfoxide reductase DmsA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_1122 2-keto-3-deoxy-phosphogluconate aldolase 0.31 Psyr_3605 Trimethylamine-N-oxide reductase (cytochrome c) — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_1122 2-keto-3-deoxy-phosphogluconate aldolase 0.31 Psyr_3605 Trimethylamine-N-oxide reductase (cytochrome c) — —
Agrobacterium fabrum C58 0.35 Atu4494 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 0.07 Atu1136 reductase — —
Bosea sp. OAE506 0.34 ABIE41_RS23505 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.07 ABIE41_RS17065 molybdopterin oxidoreductase family protein low > 77
Castellaniella sp019104865 MT123 0.34 ABCV34_RS08610 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.39 ABCV34_RS13645 trimethylamine-N-oxide reductase TorA low > 48
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS26915 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.09 QEN71_RS27460 molybdopterin oxidoreductase family protein — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16730 2-dehydro-3-deoxyphosphogluconate aldolase 0.08 BPHYT_RS17300 molybdopterin oxidoreductase — —
Paraburkholderia graminis OAS925 0.33 ABIE53_003516 2-dehydro-3-deoxyphosphogluconate aldolase/(4S)-4-hydroxy-2-oxoglutarate aldolase 0.08 ABIE53_003626 anaerobic selenocysteine-containing dehydrogenase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS16720 2-dehydro-3-deoxy-phosphogluconate aldolase 0.08 ABIE40_RS06525 molybdopterin oxidoreductase family protein — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04277 2-keto-3-deoxy-phosphogluconate aldolase 0.11 H281DRAFT_00707 trimethylamine-N-oxide reductase (cytochrome c) — —
Methylophilus sp. DMC18 0.32 GFF286 KHG/KDPG aldolase 0.08 GFF2678 Dimethyl sulfoxide reductase DmsA — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_2083 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 0.09 Ac3H11_4517 Anaerobic dehydrogenases, typically selenocysteine-containing — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_1768 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (RefSeq) 0.32 Dshi_2278 molybdopterin oxidoreductase (RefSeq) — —
Azospirillum sp. SherDot2 0.22 MPMX19_06076 KHG/KDPG aldolase 0.33 MPMX19_06512 Dimethyl sulfoxide/trimethylamine N-oxide reductase — —

Not shown: 64 genomes with orthologs for CSW01_01465 only; 6 genomes with orthologs for CSW01_09750 only