Conservation of cofitness between CSW01_01430 and CSW01_08685 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01430 Zn(2+)-responsive transcriptional regulator 1.0 CSW01_08685 glycogen synthase 0.53 12
Shewanella loihica PV-4 0.54 Shew_3411 zntR zinc-responsive transcriptional regulator (RefSeq) 0.14 Shew_1172 starch synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.50 Shewana3_0442 zntR zinc-responsive transcriptional regulator (RefSeq) 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) low > 73
Serratia liquefaciens MT49 0.50 IAI46_23295 Zn(2+)-responsive transcriptional regulator 0.23 IAI46_23925 glycogen synthase GlgA low > 87
Shewanella oneidensis MR-1 0.50 SO0443 transcriptional regulator, MerR family (NCBI ptt file) 0.14 SO1499 glgA glycogen synthase (NCBI ptt file) low > 76
Klebsiella pneumoniae MKP103 0.49 KDGMDA_06570 Zn(2+)-responsive transcriptional regulator 0.26 KDGMDA_07085 glycogen synthase GlgA low > 95
Klebsiella michiganensis M5al 0.48 BWI76_RS25700 heavy metal-responsive transcriptional regulator 0.26 BWI76_RS26200 starch synthase low > 92
Rahnella sp. WP5 0.47 EX31_RS16005 Zn(2+)-responsive transcriptional regulator 0.26 EX31_RS05010 glycogen synthase GlgA low > 89
Escherichia coli ECRC101 0.47 MCAODC_08030 zntR Zn(2+)-responsive transcriptional regulator 0.26 MCAODC_07430 glgA glycogen synthase GlgA low > 87
Escherichia coli ECOR27 0.47 NOLOHH_09300 zntR Zn(2+)-responsive transcriptional regulator 0.26 NOLOHH_08690 glgA glycogen synthase GlgA low > 76
Escherichia coli ECRC100 0.47 OKFHMN_17500 zntR Zn(2+)-responsive transcriptional regulator 0.26 OKFHMN_16900 glgA glycogen synthase GlgA low > 79
Escherichia coli BL21 0.47 ECD_03143 zntA gene transcriptional activator 0.26 ECD_03281 glycogen synthase low > 61
Escherichia coli ECRC62 0.47 BNILDI_02220 zntR Zn(2+)-responsive transcriptional regulator 0.26 BNILDI_02825 glgA glycogen synthase GlgA low > 75
Enterobacter asburiae PDN3 0.47 EX28DRAFT_0035 Zn(II)-responsive transcriptional regulator 0.26 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type low > 76
Escherichia coli ECOR38 0.47 HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator 0.26 HEPCGN_15715 glgA glycogen synthase GlgA low > 88
Escherichia coli ECRC99 0.47 KEDOAH_10640 zntR Zn(2+)-responsive transcriptional regulator 0.26 KEDOAH_11240 glgA glycogen synthase GlgA — —
Escherichia coli ECRC98 0.47 JDDGAC_21130 zntR Zn(2+)-responsive transcriptional regulator 0.26 JDDGAC_20530 glgA glycogen synthase GlgA low > 87
Escherichia coli BW25113 0.47 b3292 zntR zinc-responsive transcriptional regulator (NCBI) 0.26 b3429 glgA glycogen synthase (NCBI) low > 76
Escherichia coli ECRC102 0.47 NIAGMN_15270 zntR Zn(2+)-responsive transcriptional regulator 0.26 NIAGMN_14670 glgA glycogen synthase GlgA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00411 HTH-type transcriptional regulator ZntR 0.26 OHPLBJKB_00272 Glycogen synthase low > 74
Enterobacter sp. TBS_079 0.47 MPMX20_04200 HTH-type transcriptional regulator ZntR 0.26 MPMX20_04311 Glycogen synthase low > 85
Escherichia fergusonii Becca 0.46 EFB2_00531 HTH-type transcriptional regulator ZntR 0.26 EFB2_00390 Glycogen synthase low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS18895 Zn(2+)-responsive transcriptional regulator 0.26 ECOLIN_RS19625 glycogen synthase GlgA — —
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS22505 Zn(2+)-responsive transcriptional regulator 0.27 PagCFBP13505_RS18210 glycogen synthase GlgA low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2387 transcriptional regulator, MerR family 0.25 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Pantoea sp. MT58 0.46 IAI47_02260 Zn(2+)-responsive transcriptional regulator 0.27 IAI47_01695 glycogen synthase GlgA low > 76
Erwinia amylovora T8 0.46 OLJFJH_03745 Zn(2+)-responsive transcriptional regulator 0.25 OLJFJH_04245 glycogen synthase GlgA low > 58
Pseudomonas stutzeri RCH2 0.35 Psest_2758 Predicted transcriptional regulators 0.22 Psest_2172 glycogen/starch synthases, ADP-glucose type low > 67
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS04230 Cu(I)-responsive transcriptional regulator 0.25 ABZR87_RS17230 glycogen synthase GlgA low > 80
Alteromonas macleodii MIT1002 0.33 MIT1002_02061 Mercuric resistance operon regulatory protein 0.45 MIT1002_00235 Glycogen synthase low > 70
Variovorax sp. OAS795 0.33 ABID97_RS20720 Cd(II)/Pb(II)-responsive transcriptional regulator 0.25 ABID97_RS04535 glycogen synthase GlgA low > 91
Magnetospirillum magneticum AMB-1 0.33 AMB_RS05180 MerR family DNA-binding transcriptional regulator 0.25 AMB_RS10650 glycogen synthase — —
Variovorax sp. SCN45 0.32 GFF4682 Transcriptional regulator, MerR family 0.25 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 127
Synechocystis sp000284455 PCC 6803 0.31 SGL_RS16225 heavy metal-responsive transcriptional regulator 0.23 SGL_RS12525 glycogen synthase GlgA low > 52
Agrobacterium fabrum C58 0.30 Atu0888 transcriptional regulator, MerR family 0.26 Atu5285 glycogen synthase — —
Marinobacter adhaerens HP15 0.28 HP15_191 Hg(II)--responsive transcriptional regulator 0.28 HP15_1713 glycogen/starch synthase, ADP-glucose type low > 73
Rhodospirillum rubrum S1H 0.27 Rru_A1026 Transcriptional Regulator, MerR family (NCBI) 0.29 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI) — —

Not shown: 12 genomes with orthologs for CSW01_01430 only; 52 genomes with orthologs for CSW01_08685 only