Conservation of cofitness between CSW01_00335 and CSW01_08525 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00335 phosphomethylpyrimidine synthase 1.0 CSW01_08525 formate transporter FocA 0.52 8
Pectobacterium carotovorum WPP14 0.76 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.52 HER17_RS12300 formate transporter FocA low > 75
Rahnella sp. WP5 0.76 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.55 EX31_RS18265 formate transporter FocA low > 89
Klebsiella pneumoniae MKP103 0.75 KDGMDA_10040 phosphomethylpyrimidine synthase ThiC 0.57 KDGMDA_17950 formate transporter FocA low > 95
Dickeya dianthicola ME23 0.75 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.53 DZA65_RS09980 formate transporter FocA low > 75
Dickeya dadantii 3937 0.75 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.55 DDA3937_RS09660 formate transporter FocA low > 74
Erwinia tracheiphila SCR3 0.75 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.52 LU632_RS09780 focA formate transporter FocA low > 73
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_10885 thiC phosphomethylpyrimidine synthase ThiC 0.52 IJEDHG_20255 focA formate transporter FocA low > 61
Pantoea sp. MT58 0.75 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.52 IAI47_12875 formate transporter FocA low > 76
Escherichia coli ECOR27 0.75 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.56 NOLOHH_22065 focA formate transporter FocA low > 76
Serratia liquefaciens MT49 0.75 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.54 IAI46_08615 formate transporter FocA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4198 Thiamin biosynthesis protein ThiC 0.54 GFF3661 Formate efflux transporter (TC 2.A.44 family) low > 78
Enterobacter sp. TBS_079 0.75 MPMX20_00217 Phosphomethylpyrimidine synthase 0.54 MPMX20_01563 putative formate transporter 1 low > 85
Escherichia coli ECRC62 0.74 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.56 BNILDI_20320 focA formate transporter FocA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.56 OHPLBJKB_02764 putative formate transporter 1 low > 74
Escherichia coli BW25113 0.74 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.56 b0904 focA formate transporter (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS22620 phosphomethylpyrimidine synthase ThiC 0.56 PagCFBP13505_RS04455 formate transporter FocA low > 74
Klebsiella michiganensis M5al 0.74 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.56 BWI76_RS09740 formate transporter FocA low > 92
Escherichia coli ECRC101 0.74 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.56 MCAODC_24895 focA formate transporter FocA low > 87
Dickeya dianthicola 67-19 0.74 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.53 HGI48_RS09670 formate transporter FocA low > 71
Escherichia coli ECRC102 0.74 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.56 NIAGMN_03225 focA formate transporter FocA low > 80
Escherichia coli ECRC98 0.74 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.56 JDDGAC_09115 focA formate transporter FocA low > 87
Escherichia coli ECRC100 0.74 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.56 OKFHMN_05505 focA formate transporter FocA low > 79
Escherichia coli Nissle 1917 0.74 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.56 ECOLIN_RS04790 formate transporter FocA low > 55
Escherichia coli BL21 0.74 ECD_03871 phosphomethylpyrimidine synthase 0.56 ECD_00908 formate channel low > 61
Escherichia coli ECRC99 0.74 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.56 KEDOAH_22230 focA formate transporter FocA — —
Alteromonas macleodii MIT1002 0.74 MIT1002_00097 Phosphomethylpyrimidine synthase 0.16 MIT1002_01529 Formate channel 1 low > 70
Pseudomonas sp. S08-1 0.70 OH686_15885 phosphomethylpyrimidine synthase 0.15 OH686_20565 Nitrite transporter from formate/nitrite family low > 80
Pseudomonas sp. DMC3 0.70 GFF3183 Phosphomethylpyrimidine synthase 0.11 GFF168 Inner membrane protein YfdC low > 89
Marinobacter adhaerens HP15 0.70 HP15_453 thiamine biosynthesis protein thiC 0.14 HP15_3885 formate and nitrite transporter low > 73
Pseudomonas stutzeri RCH2 0.69 Psest_0477 thiamine biosynthesis protein ThiC 0.14 Psest_2408 Formate/nitrite family of transporters low > 67
Pseudomonas sp. RS175 0.69 PFR28_05091 Phosphomethylpyrimidine synthase 0.11 PFR28_04199 Inner membrane protein YfdC low > 88
Pseudomonas sp. SVBP6 0.69 COO64_RS17755 thiC phosphomethylpyrimidine synthase ThiC 0.11 COO64_RS17220 formate/nitrite transporter family protein low > 93
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_08810 thiamine biosynthesis protein ThiC 0.10 AO356_13620 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.10 PfGW456L13_1053 Putative transport low > 87
Methylophilus sp. DMC18 0.69 GFF2191 Phosphomethylpyrimidine synthase 0.16 GFF213 putative formate transporter 1 low > 43
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.09 Pf1N1B4_2387 Putative transport low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_0544 hydroxymethylpyrimidine synthase 0.25 Psyr_4660 Formate/nitrite transporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_0544 hydroxymethylpyrimidine synthase 0.25 Psyr_4660 Formate/nitrite transporter low > 86
Pseudomonas segetis P6 0.68 MPMX49_04184 Phosphomethylpyrimidine synthase 0.14 MPMX49_02117 putative formate transporter 1 low > 75
Acinetobacter baumannii LAC-4 0.68 RR41_RS17715 phosphomethylpyrimidine synthase ThiC 0.09 RR41_RS00280 formate/nitrite transporter family protein low > 55
Pontibacter actiniarum KMM 6156, DSM 19842 0.68 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.09 CA264_20810 transporter low > 74
Castellaniella sp019104865 MT123 0.68 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.18 ABCV34_RS06885 formate/nitrite transporter family protein low > 48
Variovorax sp. OAS795 0.63 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.14 ABID97_RS16035 formate/nitrite transporter family protein low > 91
Bosea sp. OAE506 0.58 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.27 ABIE41_RS15280 formate/nitrite transporter family protein low > 77
Rhodospirillum rubrum S1H 0.56 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.33 Rru_A0311 Formate/nitrite transporter (NCBI) low > 58

Not shown: 66 genomes with orthologs for CSW01_00335 only; 3 genomes with orthologs for CSW01_08525 only