Conservation of cofitness between CSW01_04975 and CSW01_08330 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04975 transcriptional regulator 1.0 CSW01_08330 hypothetical protein 0.49 14
Enterobacter sp. TBS_079 0.56 MPMX20_01085 HTH-type transcriptional regulator CueR 0.15 MPMX20_01423 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4405 HTH-type transcriptional regulator cueR 0.16 GFF694 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG low > 78
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2473 Cu(I)-responsive transcriptional regulator 0.15 EX28DRAFT_2196 Multidrug resistance efflux pump low > 76
Escherichia coli ECRC98 0.54 JDDGAC_11680 cueR Cu(I)-responsive transcriptional regulator 0.16 JDDGAC_09935 hlyD secretion protein HlyD — —
Klebsiella michiganensis M5al 0.54 BWI76_RS06910 transcriptional regulator 0.14 BWI76_RS08880 secretion protein HlyD low > 92
Escherichia coli ECRC101 0.54 MCAODC_27250 cueR Cu(I)-responsive transcriptional regulator 0.16 MCAODC_25515 hlyD secretion protein HlyD — —
Escherichia coli ECRC101 0.54 OKFHMN_08035 cueR Cu(I)-responsive transcriptional regulator 0.16 OKFHMN_06300 hlyD secretion protein HlyD — —
Escherichia coli ECOR38 0.54 HEPCGN_06670 cueR Cu(I)-responsive transcriptional regulator 0.16 HEPCGN_01740 hlyD secretion protein HlyD low > 85
Escherichia coli ECRC99 0.54 KEDOAH_19935 cueR Cu(I)-responsive transcriptional regulator 0.16 KEDOAH_21610 hlyD secretion protein HlyD — —
Escherichia coli ECRC102 0.54 NIAGMN_06085 cueR Cu(I)-responsive transcriptional regulator 0.16 NIAGMN_04345 hlyD secretion protein HlyD — —
Escherichia coli BW25113 0.54 b0487 cueR DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) 0.16 b0795 ybhG hypothetical protein (NCBI) 0.21 1
Rahnella sp. WP5 0.54 EX31_RS22580 Cu(I)-responsive transcriptional regulator 0.13 EX31_RS00880 secretion protein HlyD 0.44 13
Escherichia coli ECRC62 0.54 BNILDI_22420 cueR Cu(I)-responsive transcriptional regulator 0.16 BNILDI_20935 hlyD secretion protein HlyD — —
Escherichia coli BL21 0.54 ECD_00438 copper-responsive regulon transcriptional regulator 0.16 ECD_00762 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor low > 60
Escherichia coli ECOR27 0.54 NOLOHH_01000 cueR Cu(I)-responsive transcriptional regulator 0.16 NOLOHH_22655 hlyD secretion protein HlyD low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03187 HTH-type transcriptional regulator CueR 0.16 OHPLBJKB_02918 hypothetical protein low > 73
Escherichia fergusonii Becca 0.53 EFB2_03572 HTH-type transcriptional regulator CueR 0.15 EFB2_03310 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS02880 Cu(I)-responsive transcriptional regulator 0.15 ECOLIN_RS04235 secretion protein HlyD — —
Serratia liquefaciens MT49 0.51 IAI46_05315 Cu(I)-responsive transcriptional regulator 0.14 IAI46_06610 secretion protein HlyD low > 86
Dickeya dianthicola 67-19 0.50 HGI48_RS05895 Cu(I)-responsive transcriptional regulator 0.11 HGI48_RS08780 secretion protein HlyD low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS06230 Cu(I)-responsive transcriptional regulator 0.14 DZA65_RS09070 secretion protein HlyD low > 75
Dickeya dadantii 3937 0.50 DDA3937_RS05850 Cu(I)-responsive transcriptional regulator 0.13 DDA3937_RS08640 secretion protein HlyD low > 74
Erwinia tracheiphila SCR3 0.47 LU632_RS15290 cueR Cu(I)-responsive transcriptional regulator 0.13 LU632_RS22040 HlyD family efflux transporter periplasmic adaptor subunit low > 74
Pseudomonas sp. S08-1 0.39 OH686_07400 Cu(I)-responsive transcriptional regulator 0.31 OH686_05800 hypothetical protein low > 80
Dechlorosoma suillum PS 0.36 Dsui_1064 Cu(I)-responsive transcriptional regulator 0.09 Dsui_2342 multidrug resistance efflux pump low > 51
Sinorhizobium meliloti 1021 0.36 SM_b21579 MerR family transcriptional regulator 0.12 SM_b21207 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS23915 Cu(I)-responsive transcriptional regulator 0.11 QEN71_RS17405 HlyD family efflux transporter periplasmic adaptor subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04982 transcriptional regulator, MerR family 0.12 H281DRAFT_03452 HlyD family secretion protein low > 103
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS08015 MerR family transcriptional regulator 0.11 HSERO_RS09730 glycoside hydrolase family 43 low > 78
Magnetospirillum magneticum AMB-1 0.34 AMB_RS09150 Cu(I)-responsive transcriptional regulator 0.12 AMB_RS00920 secretion protein HlyD low > 64
Azospirillum sp. SherDot2 0.33 MPMX19_06429 HTH-type transcriptional regulator HmrR 0.14 MPMX19_01838 hypothetical protein low > 112
Shewanella sp. ANA-3 0.32 Shewana3_2762 MerR family transcriptional regulator (RefSeq) 0.30 Shewana3_2750 secretion protein HlyD family protein (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_1785 MerR family transcriptional regulator (RefSeq) 0.35 Sama_3589 HlyD family secretion protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.32 SO1687 transcriptional regulator, MerR family (NCBI ptt file) 0.33 SO1705 hypothetical HlyD family secretion protein (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.32 AZOBR_RS27570 MerR family transcriptional regulator 0.11 AZOBR_RS05690 hypothetical protein low > 97
Marinobacter adhaerens HP15 0.31 HP15_89 transcriptional regulator, MerR family protein 0.41 HP15_1349 membrane-fusion protein low > 73
Variovorax sp. OAS795 0.29 ABID97_RS02815 Cu(I)-responsive transcriptional regulator 0.13 ABID97_RS10425 HlyD family efflux transporter periplasmic adaptor subunit low > 91

Not shown: 24 genomes with orthologs for CSW01_04975 only; 16 genomes with orthologs for CSW01_08330 only