Conservation of cofitness between CSW01_03155 and CSW01_08190 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03155 RNA polymerase-binding transcription factor DksA 1.0 CSW01_08190 ABC transporter permease 0.89 7
Shewanella loihica PV-4 0.83 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) 0.16 Shew_3202 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.83 SO0874 dksA DnaK suppressor protein (NCBI ptt file) 0.16 SO0856 conserved hypothetical protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.82 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) 0.07 Sama_2956 putative ABC transport system permease protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.82 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) 0.16 Shewana3_3422 hypothetical protein (RefSeq) low > 73
Pseudomonas simiae WCS417 0.69 PS417_23875 molecular chaperone DnaK 0.16 PS417_17770 ABC transporter permease — —
Pseudomonas lactucae CFBP13502 0.69 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA 0.16 GEMAOFIL_03824 hypothetical protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family 0.16 Pf1N1B4_5881 AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system — —
Pseudomonas sp. RS175 0.68 PFR28_03714 RNA polymerase-binding transcription factor DksA 0.14 PFR28_02765 hypothetical protein low > 88
Pseudomonas sp. DMC3 0.68 GFF4034 RNA polymerase-binding transcription factor DksA 0.09 GFF970 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_16095 molecular chaperone DnaK 0.14 AO356_01125 ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_14420 molecular chaperone DnaK 0.16 AO353_21260 ABC transporter permease low > 101
Pseudomonas sp. BP01 0.68 JOY50_RS27695 dksA RNA polymerase-binding protein DksA 0.07 JOY50_RS08155 FtsX-like permease family protein low > 84
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0835 transcriptional regulator, TraR/DksA family 0.08 Psyr_3744 Protein of unknown function DUF214 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0835 transcriptional regulator, TraR/DksA family 0.08 Psyr_3744 Protein of unknown function DUF214 low > 86
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA 0.16 PFLU_RS19545 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA 0.16 PFLU_RS19545 ABC transporter permease low > 109
Pseudomonas sp. SVBP6 0.67 COO64_RS15070 dksA RNA polymerase-binding protein DksA 0.07 COO64_RS08045 ABC transporter permease low > 93
Pseudomonas putida KT2440 0.64 PP_4693 RNA polymerase-binding transcription factor DksA 0.07 PP_3734 putative ABC transporter, permease protein low > 96
Marinobacter adhaerens HP15 0.63 HP15_332 transcriptional regulator, TraR/DksA family 0.08 HP15_4005 membrane protein containing DUF214, permase predicted — —
Rhizobium sp. OAE497 0.35 ABIE40_RS10345 RNA polymerase-binding protein DksA 0.14 ABIE40_RS27035 FtsX-like permease family protein low > 107
Agrobacterium fabrum C58 0.35 Atu1359 dnaK deletion suppressor protein 0.16 Atu5453 ABC transporter membrane spanning protein low > 89
Phaeobacter inhibens DSM 17395 0.32 PGA1_c11040 dnaK suppressor protein DksA 0.10 PGA1_c16140 putative lipoprotein transport protein low > 62
Rhodopseudomonas palustris CGA009 0.30 TX73_020255 RNA polymerase-binding protein DksA 0.15 TX73_025000 FtsX-like permease family protein low > 86

Not shown: 49 genomes with orthologs for CSW01_03155 only; 6 genomes with orthologs for CSW01_08190 only