Conservation of cofitness between CSW01_08080 and CSW01_06740 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08080 HlyD family secretion protein 1.0 CSW01_06740 2-methylcitrate synthase 0.46 14
Shewanella sp. ANA-3 0.58 Shewana3_3639 secretion protein HlyD family protein (RefSeq) 0.70 Shewana3_3826 methylcitrate synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4089 HlyD family secretion protein (NCBI ptt file) 0.69 SO0344 prpC 2-methylcitrate synthase (EC 2.3.3.5) (from data) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0478 HlyD family secretion protein (RefSeq) 0.69 Sama_3295 methylcitrate synthase (RefSeq) low > 62
Shewanella loihica PV-4 0.54 Shew_0412 secretion protein HlyD family protein (RefSeq) 0.69 Shew_1821 2-methylcitrate synthase/citrate synthase II (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.43 Ac3H11_502 Membrane-fusion protein 0.51 Ac3H11_2322 2-methylcitrate synthase (EC 2.3.3.5) low > 79
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS02180 efflux RND transporter periplasmic adaptor subunit 0.22 HMPREF1058_RS14335 citrate/2-methylcitrate synthase low > 67
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS01370 efflux RND transporter periplasmic adaptor subunit 0.22 ABI39_RS09965 citrate/2-methylcitrate synthase 0.45 5
Variovorax sp. SCN45 0.40 GFF1141 Membrane-fusion protein 0.52 GFF271 2-methylcitrate synthase (EC 2.3.3.5) 0.81 39
Bacteroides thetaiotaomicron VPI-5482 0.38 BT3904 conserved hypothetical protein (NCBI ptt file) 0.22 BT_2070 methylcitrate synthase (RefSeq) low > 81
Bacteroides ovatus ATCC 8483 0.37 BACOVA_01127 auxiliary transport protein, membrane fusion protein (MFP) family protein 0.21 BACOVA_03312 citrate (Si)-synthase low > 96
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS06670 HlyD family efflux transporter periplasmic adaptor subunit 0.22 HMPREF1181_RS08295 citrate/2-methylcitrate synthase low > 56
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10220 efflux RND transporter periplasmic adaptor subunit 0.23 HMPREF1078_RS07505 citrate/2-methylcitrate synthase low > 61
Acinetobacter baumannii LAC-4 0.33 RR41_RS04515 efflux RND transporter periplasmic adaptor subunit 0.52 RR41_RS18480 2-methylcitrate synthase low > 55
Acinetobacter radioresistens SK82 0.30 MPMX26_02221 Colistin resistance protein EmrA 0.68 MPMX26_01290 2-methylcitrate synthase — —
Pseudomonas aeruginosa PA14 0.26 IKLFDK_17460 secretion protein HlyD 0.66 IKLFDK_03440 2-methylcitrate synthase low > 98
Pseudomonas aeruginosa PUPa3 0.26 DQ20_RS41155 efflux RND transporter periplasmic adaptor subunit 0.66 DQ20_RS44330 prpC;go_function=2-methylcitrate 2-methylcitrate synthase low > 101
Pseudomonas aeruginosa MRSN321 0.26 DY961_RS15925 efflux RND transporter periplasmic adaptor subunit 0.66 DY961_RS08520 prpC;go_function=2-methylcitrate 2-methylcitrate synthase low > 100
Pseudomonas simiae WCS417 0.09 PS417_27320 hemolysin secretion protein D 0.68 PS417_21075 methylcitrate synthase — —
Pseudomonas fluorescens SBW25 0.09 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit 0.68 PFLU_RS22685 2-methylcitrate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit 0.68 PFLU_RS22685 2-methylcitrate synthase low > 109
Pseudomonas stutzeri RCH2 0.08 Psest_4259 Multidrug resistance efflux pump 0.68 Psest_2320 2-methylcitrate synthase/citrate synthase II low > 67
Pseudomonas fluorescens FW300-N2E2 0.08 Pf6N2E2_4473 HlyD family secretion protein 0.68 Pf6N2E2_6062 2-methylcitrate synthase (EC 2.3.3.5) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.08 AO356_12980 hemolysin secretion protein D 0.68 AO356_20870 2-methylcitrate synthase low > 104

Not shown: 9 genomes with orthologs for CSW01_08080 only; 56 genomes with orthologs for CSW01_06740 only