Conservation of cofitness between CSW01_08645 and CSW01_05770 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08645 two-component system response regulator TorR 1.0 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.56 2
Shewanella amazonensis SB2B 0.58 Sama_0983 DNA-binding transcriptional regulator TorR (RefSeq) 0.56 Sama_1946 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_1051 DNA-binding transcriptional regulator TorR (RefSeq) 0.59 Shewana3_1849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02672 TorCAD operon transcriptional regulatory protein TorR 0.68 OHPLBJKB_01676 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 74
Escherichia coli BW25113 0.55 b0995 torR DNA-binding response regulator in two-component regulatory system with TorS (NCBI) 0.67 b2024 hisA N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) low > 76
Shewanella loihica PV-4 0.55 Shew_2803 DNA-binding transcriptional regulator TorR (RefSeq) 0.58 Shew_2202 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 60
Escherichia coli BL21 0.55 ECD_00998 response regulator in two-component regulatory system with TorS 0.68 ECD_01926 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase low > 61
Escherichia coli ECOR38 0.55 HEPCGN_23435 torR two-component system response regulator TorR 0.68 HEPCGN_03200 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 88
Escherichia coli ECRC98 0.55 JDDGAC_08320 torR two-component system response regulator TorR 0.67 JDDGAC_28605 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 87
Escherichia coli ECRC100 0.55 OKFHMN_04710 torR two-component system response regulator TorR 0.67 OKFHMN_24495 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 79
Escherichia coli ECRC62 0.55 BNILDI_19765 torR two-component system response regulator TorR 0.68 BNILDI_14720 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 75
Escherichia coli ECRC101 0.55 MCAODC_24095 torR two-component system response regulator TorR 0.67 MCAODC_20445 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 87
Escherichia coli ECRC102 0.55 NIAGMN_23140 torR two-component system response regulator TorR 0.67 NIAGMN_22440 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 80
Escherichia coli ECRC99 0.55 KEDOAH_23035 torR two-component system response regulator TorR 0.67 KEDOAH_03655 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase — —
Escherichia coli ECOR27 0.55 NOLOHH_21600 torR two-component system response regulator TorR 0.68 NOLOHH_15810 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 76
Escherichia fergusonii Becca 0.55 EFB2_03084 TorCAD operon transcriptional regulatory protein TorR 0.68 EFB2_01832 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Escherichia coli Nissle 1917 0.55 ECOLIN_RS05195 two-component system response regulator TorR 0.67 ECOLIN_RS11965 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Shewanella oneidensis MR-1 0.54 SO1228 torR torcad operon transcriptional regulatory protein TorR (NCBI ptt file) 0.58 SO2069 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF1770 TorCAD operon transcriptional regulatory protein TorR 0.66 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 78
Rhodospirillum rubrum S1H 0.51 Rru_A1282 Two component Transcriptional regulator, Winged helix family (NCBI) 0.25 Rru_A3595 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI) — —
Dinoroseobacter shibae DFL-12 0.45 Dshi_2279 two component transcriptional regulator, winged helix family (RefSeq) 0.28 Dshi_2578 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (RefSeq) — —
Azospirillum sp. SherDot2 0.44 MPMX19_05849 TorCAD operon transcriptional regulatory protein TorR 0.30 MPMX19_02543 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 112
Pseudomonas sp. SVBP6 0.44 COO64_RS21035 response regulator 0.24 COO64_RS00215 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 93
Pseudomonas sp. BP01 0.44 JOY50_RS08135 response regulator 0.25 JOY50_RS25515 hisA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 84
Pseudomonas putida KT2440 0.44 PP_3730 Transcriptional regulatory protein AruR 0.25 PP_0292 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 96
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_24810 transcriptional regulator 0.24 AO353_12085 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3214 probable two-component response regulator 0.24 PfGW456L13_359 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 87
Pseudomonas aeruginosa PA14 0.42 IKLFDK_28620 Transcriptional regulatory protein AruR 0.25 IKLFDK_27800 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase low > 98
Pseudomonas aeruginosa MRSN321 0.41 DY961_RS10715 aruR;inference=COORDINATES two-component system response regulator AruR 0.25 DY961_RS11535 hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase low > 100
Pseudomonas aeruginosa PUPa3 0.41 DQ20_RS51345 aruR;inference=COORDINATES two-component system response regulator AruR 0.25 DQ20_RS50565 hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase low > 101
Variovorax sp. SCN45 0.40 GFF6945 Two-component transcriptional response regulator, OmpR family 0.25 GFF5351 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) — —
Variovorax sp. OAS795 0.40 ABID97_RS16175 response regulator transcription factor 0.25 ABID97_RS23130 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS04355 response regulator transcription factor 0.45 ABZR86_RS06710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_1631 two component transcriptional regulator, winged helix family (RefSeq) 0.26 DvMF_3120 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 51
Agrobacterium fabrum C58 0.32 Atu6178 two component response regulator 0.25 Atu0040 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase low > 89
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07665 response regulator transcription factor 0.37 HMPREF1058_RS06170 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03180 transcriptional regulatory protein RprY 0.35 BACOVA_00220 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS00085 response regulator transcription factor 0.37 ABI39_RS19925 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase — —

Not shown: 0 genomes with orthologs for CSW01_08645 only; 84 genomes with orthologs for CSW01_05770 only