Conservation of cofitness between CSW01_04870 and CSW01_05005 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04870 ribosome silencing factor 1.0 CSW01_05005 epimerase 0.47 17
Dickeya dianthicola 67-19 0.71 HGI48_RS06225 ribosome silencing factor 0.50 HGI48_RS14375 TIGR01777 family protein low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS15235 ribosome silencing factor 0.49 HER17_RS07050 TIGR01777 family oxidoreductase low > 75
Dickeya dianthicola ME23 0.70 DZA65_RS06570 ribosome silencing factor 0.50 DZA65_RS15305 TIGR01777 family protein low > 75
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS03290 ribosome silencing factor 0.48 PagCFBP13505_RS00280 TIGR01777 family protein low > 74
Pantoea sp. MT58 0.70 IAI47_14015 ribosome silencing factor 0.47 IAI47_06305 TIGR01777 family protein low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS06180 ribosome silencing factor 0.50 DDA3937_RS14405 TIGR01777 family protein low > 74
Escherichia coli Nissle 1917 0.67 ECOLIN_RS03470 ribosome silencing factor 0.47 ECOLIN_RS13370 TIGR01777 family oxidoreductase — —
Escherichia coli BW25113 0.67 b0637 ybeB orf, hypothetical protein (VIMSS) 0.47 b2304 yfcH conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03069 Ribosomal silencing factor RsfS 0.47 OHPLBJKB_01401 Epimerase family protein low > 74
Enterobacter sp. TBS_079 0.67 MPMX20_01296 Ribosomal silencing factor RsfS 0.47 MPMX20_03239 Epimerase family protein low > 85
Escherichia coli BL21 0.67 ECD_00606 ribosomal silencing factor 0.47 ECD_02229 putative NAD-dependent nucleotide-sugar epimerase low > 61
Escherichia fergusonii Becca 0.67 EFB2_03455 Ribosomal silencing factor RsfS 0.47 EFB2_01554 Epimerase family protein low > 86
Escherichia coli ECRC98 0.67 JDDGAC_11000 rsfS ribosome silencing factor 0.47 JDDGAC_26720 yfcH Epimerase family protein YfcH low > 87
Escherichia coli ECRC99 0.67 KEDOAH_20615 rsfS ribosome silencing factor 0.47 KEDOAH_05440 yfcH Epimerase family protein YfcH — —
Escherichia coli ECOR38 0.67 HEPCGN_00920 rsfS ribosome silencing factor 0.47 HEPCGN_21960 yfcH Epimerase family protein YfcH low > 88
Escherichia coli ECRC102 0.67 NIAGMN_05410 rsfS ribosome silencing factor 0.47 NIAGMN_20525 yfcH Epimerase family protein YfcH low > 80
Escherichia coli ECRC100 0.67 OKFHMN_07355 rsfS ribosome silencing factor 0.47 OKFHMN_22755 yfcH Epimerase family protein YfcH low > 79
Escherichia coli ECOR27 0.67 NOLOHH_23730 rsfS ribosome silencing factor 0.47 NOLOHH_14375 yfcH Epimerase family protein YfcH low > 76
Escherichia coli ECRC62 0.67 BNILDI_21740 rsfS ribosome silencing factor 0.47 BNILDI_13295 yfcH Epimerase family protein YfcH low > 75
Escherichia coli ECRC101 0.67 MCAODC_26570 rsfS ribosome silencing factor 0.47 MCAODC_13795 yfcH Epimerase family protein YfcH low > 87
Erwinia amylovora T8 0.66 OLJFJH_17215 ribosome silencing factor 0.45 OLJFJH_11310 epimerase low > 58
Rahnella sp. WP5 0.65 EX31_RS23130 ribosome silencing factor 0.46 EX31_RS19530 TIGR01777 family protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4550 Iojap protein 0.47 GFF1914 Cell division inhibitor low > 78
Klebsiella pneumoniae MKP103 0.65 KDGMDA_16405 ribosome silencing factor 0.46 KDGMDA_27145 epimerase low > 95
Klebsiella michiganensis M5al 0.65 BWI76_RS08045 ribosome silencing factor RsfS 0.46 BWI76_RS20300 epimerase — —
Serratia liquefaciens MT49 0.65 IAI46_05940 ribosome silencing factor 0.52 IAI46_17780 TIGR01777 family protein — —
Shewanella oneidensis MR-1 0.62 SO1170 iojap domain protein (NCBI ptt file) 0.44 SO2922 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_0997 iojap-like protein (RefSeq) 0.44 Shewana3_1542 hypothetical protein (RefSeq) — —
Erwinia tracheiphila SCR3 0.59 LU632_RS16365 rsfS ribosome silencing factor 0.46 LU632_RS07880 TIGR01777 family oxidoreductase low > 73
Alteromonas macleodii MIT1002 0.59 MIT1002_01853 Ribosomal silencing factor RsfS 0.48 MIT1002_01417 Epimerase family protein low > 70
Shewanella amazonensis SB2B 0.58 Sama_2586 iojap domain-containing protein (RefSeq) 0.46 Sama_1488 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.57 Shew_2933 iojap-like protein (RefSeq) 0.46 Shew_2400 hypothetical protein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0086 iojap-like ribosome-associated protein 0.38 B158DRAFT_1338 TIGR01777 family protein low > 40
Pseudomonas aeruginosa MRSN321 0.53 DY961_RS12830 rsfS;go_function=ribosome ribosome silencing factor 0.37 DY961_RS29110 TIGR01777 family oxidoreductase low > 100
Pseudomonas aeruginosa PA14 0.53 IKLFDK_20655 ribosome silencing factor 0.36 IKLFDK_00215 epimerase low > 98
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS48160 rsfS;go_function=ribosome ribosome silencing factor 0.37 DQ20_RS55585 TIGR01777 family oxidoreductase low > 101
Pseudomonas sp. S08-1 0.50 OH686_09330 ribosome silencing factor 0.38 OH686_17890 Cell division inhibitor (YfcH in EC), contains epimerase/dehydratase and DUF1731 domains low > 80
Marinobacter adhaerens HP15 0.48 HP15_603 Iojap-related protein 0.41 HP15_1503 nucleoside-diphosphate sugar epimerase low > 73
Pseudomonas segetis P6 0.48 MPMX49_01050 Ribosomal silencing factor RsfS 0.42 MPMX49_01353 Epimerase family protein low > 75
Pseudomonas stutzeri RCH2 0.47 Psest_0510 iojap-like ribosome-associated protein 0.35 Psest_2394 TIGR01777 family protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4367 Iojap-related protein 0.40 Psyr_0966 Conserved hypothetical protein YfcH low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4367 Iojap-related protein 0.40 Psyr_0966 Conserved hypothetical protein YfcH low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_2428 iojap-like ribosome-associated protein 0.28 Echvi_1612 TIGR01777 family protein low > 79
Cellulophaga baltica 18 0.32 M666_RS08955 ribosome silencing factor 0.27 M666_RS19240 TIGR01777 family oxidoreductase low > 67

Not shown: 10 genomes with orthologs for CSW01_04870 only; 28 genomes with orthologs for CSW01_05005 only