Conservation of cofitness between CSW01_03550 and CSW01_04710 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03550 transcriptional activator protein NhaR 1.0 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase 0.53 4
Serratia liquefaciens MT49 0.68 IAI46_03090 transcriptional activator NhaR 0.67 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Enterobacter sp. TBS_079 0.66 MPMX20_00723 Transcriptional activator protein NhaR 0.67 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Pectobacterium carotovorum WPP14 0.66 HER17_RS02855 transcriptional activator NhaR 0.66 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS18355 transcriptional activator NhaR 0.61 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1120 Transcriptional activator NhaR 0.64 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3629 Transcriptional regulator 0.68 EX28DRAFT_4457 nucleotide sugar dehydrogenase low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS04320 transcriptional activator NhaR 0.65 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase low > 92
Escherichia coli Nissle 1917 0.65 ECOLIN_RS00110 transcriptional activator NhaR 0.66 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase low > 55
Escherichia fergusonii Becca 0.65 EFB2_04023 Transcriptional activator protein NhaR 0.65 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Klebsiella pneumoniae MKP103 0.65 KDGMDA_12590 transcriptional activator NhaR 0.65 KDGMDA_09575 UDP-N-acetyl-D-mannosamine dehydrogenase low > 95
Rahnella sp. WP5 0.65 EX31_RS03885 transcriptional activator NhaR 0.65 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase low > 89
Escherichia coli ECRC62 0.64 BNILDI_08250 nhaR transcriptional activator NhaR 0.66 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Escherichia coli ECOR38 0.64 HEPCGN_09010 nhaR transcriptional activator NhaR 0.66 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Escherichia coli BL21 0.64 ECD_00019 transcriptional activator of nhaA 0.66 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase low > 61
Escherichia coli ECOR27 0.64 NOLOHH_03355 nhaR transcriptional activator NhaR 0.66 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03641 Transcriptional activator protein NhaR 0.66 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Escherichia coli BW25113 0.64 b0020 nhaR DNA-binding transcriptional activator (NCBI) 0.66 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) low > 76
Escherichia coli ECRC99 0.64 KEDOAH_17130 nhaR transcriptional activator NhaR 0.66 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC101 0.64 MCAODC_01540 nhaR transcriptional activator NhaR 0.66 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Escherichia coli ECRC98 0.64 JDDGAC_14620 nhaR transcriptional activator NhaR 0.66 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Escherichia coli ECRC102 0.64 NIAGMN_08875 nhaR transcriptional activator NhaR 0.66 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Escherichia coli ECRC100 0.64 OKFHMN_11025 nhaR transcriptional activator NhaR 0.66 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 79
Pantoea sp. MT58 0.62 IAI47_16160 transcriptional activator NhaR 0.65 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS12835 transcriptional activator NhaR 0.64 PagCFBP13505_RS15500 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Shewanella oneidensis MR-1 0.59 SO1338 nhaR transcriptional activator protein NhaR (NCBI ptt file) 0.20 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.57 Sama_0870 nhaR transcriptional activator NhaR (RefSeq) 0.18 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) low > 62
Pseudomonas sp. BP01 0.36 JOY50_RS04150 nhaR transcriptional activator NhaR 0.19 JOY50_RS16100 tviB Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 84
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_02178 Transcriptional activator protein NhaR 0.70 GEMAOFIL_01777 UDP-N-acetyl-D-mannosamine dehydrogenase low > 96
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_2543 Transcriptional regulator, LysR family 0.69 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_01805 LysR family transcriptional regulator 0.24 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Pseudomonas sp. RS175 0.33 PFR28_01216 Transcriptional activator protein NhaR 0.70 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS11585 transcriptional activator NhaR 0.69 QEN71_RS40735 UDP-N-acetyl-D-mannosamine dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.30 ABIE53_004867 LysR family transcriptional activator of nhaA 0.20 ABIE53_000508 UDP-N-acetyl-D-galactosamine dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS10255 LysR family transcriptional regulator 0.70 BPHYT_RS29845 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS19615 LysR family transcriptional regulator 0.18 HSERO_RS13730 UDP-N-acetyl-D-galactosamine dehydrogenase low > 78
Marinobacter adhaerens HP15 0.23 HP15_1551 transcriptional Regulator, LysR family protein 0.63 HP15_2381 UDP-glucose 6-dehydrogenase low > 73

Not shown: 19 genomes with orthologs for CSW01_03550 only; 47 genomes with orthologs for CSW01_04710 only