| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_06385 | | peptidase | 1.0 | CSW01_03695 | | ribosomal large subunit pseudouridine synthase D | 0.87 | 14 |
| Pseudomonas aeruginosa MRSN321 | 0.58 | DY961_RS24640 | | imelysin family protein | 0.51 | DY961_RS23730 | rluD;go_function=RNA | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.58 | DQ20_RS57090 | | imelysin family protein | 0.51 | DQ20_RS56195 | rluD;go_function=RNA | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.58 | IKLFDK_02250 | | peptidase | 0.51 | IKLFDK_00810 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 98 |
| Pseudomonas segetis P6 | 0.58 | MPMX49_03765 | | hypothetical protein | 0.53 | MPMX49_03922 | | Ribosomal large subunit pseudouridine synthase D | low | > 75 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_17390 | | Iron-regulated protein A precursor | 0.53 | OH686_16410 | | LSU rRNA pseudouridine(1911/1915/1917) synthase | low | > 80 |
| Pseudomonas putida KT2440 | 0.58 | PP_0913 | | conserved exported protein of unknown function | 0.53 | PP_0623 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | — | — |
| Pseudomonas sp. BP01 | 0.57 | JOY50_RS14205 | | imelysin family protein | 0.54 | JOY50_RS27130 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 84 |
| Pseudomonas orientalis W4I3 | 0.57 | QF045_RS24330 | | imelysin family protein | 0.54 | QF045_RS06805 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.57 | PFLU_RS23820 | | peptidase | 0.54 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.57 | PFLU_RS23820 | | peptidase | 0.54 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_4061 | | imelysin, Metallo peptidase, MEROPS family M75 | 0.54 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_4061 | | imelysin, Metallo peptidase, MEROPS family M75 | 0.54 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_22195 | | peptidase | 0.54 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1776 | | Iron-regulated protein A precursor | 0.54 | PfGW456L13_1493 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_2853 | | Iron-regulated protein A precursor | 0.54 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Marinobacter adhaerens HP15 | 0.56 | HP15_2564 | | lipoprotein | 0.51 | HP15_527 | | pseudouridine synthase, RluA family | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_715 | | Iron-regulated protein A precursor | 0.54 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_05015 | | peptidase | 0.55 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | low | > 104 |
| Pseudomonas sp. SVBP6 | 0.56 | COO64_RS12080 | | imelysin family protein | 0.54 | COO64_RS11055 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 93 |
| Pseudomonas sp. RS175 | 0.55 | PFR28_00604 | | hypothetical protein | 0.54 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | low | > 88 |
| Pseudomonas sp. DMC3 | 0.55 | GFF5064 | | hypothetical protein | 0.54 | GFF4004 | | Ribosomal large subunit pseudouridine synthase D | 0.68 | 45 |
| Pseudomonas lactucae CFBP13502 | 0.54 | GEMAOFIL_04575 | | hypothetical protein | 0.54 | GEMAOFIL_00969 | | Ribosomal large subunit pseudouridine synthase D | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.54 | AO353_03975 | | peptidase | 0.54 | AO353_14220 | | ribosomal large subunit pseudouridine synthase D | low | > 101 |
| Phaeobacter inhibens DSM 17395 | 0.44 | PGA1_c08290 | | putative peptidase M75 | 0.32 | PGA1_c09000 | | ribosomal large subunit pseudouridine synthase D | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_0563 | | lipoprotein, putative (RefSeq) | 0.28 | Dshi_2610 | | pseudouridine synthase, RluA family (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.42 | Atu0288 | | hypothetical protein | 0.33 | Atu2443 | | ribosomal large subunit pseudouridine synthase, RluD subfamily | — | — |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_05320 | | hypothetical protein | 0.33 | MPMX19_05442 | | Ribosomal large subunit pseudouridine synthase D | low | > 112 |
| Sinorhizobium meliloti 1021 | 0.42 | SMc00402 | | signal peptide protein | 0.33 | SMc00647 | | ribosomal large subunit pseudouridine synthase | low | > 103 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS01290 | | imelysin family protein | 0.36 | ABIE40_RS14790 | | RluA family pseudouridine synthase | low | > 107 |
| Xanthobacter sp. DMC5 | 0.40 | GFF3469 | | hypothetical protein | 0.36 | GFF2508 | | Ribosomal large subunit pseudouridine synthase D | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF2484 | | Iron-regulated protein A precursor | 0.35 | GFF4870 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.36 | 26 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_1655 | | Iron-regulated protein A precursor | 0.32 | Ac3H11_1787 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 79 |
| Cellulophaga baltica 18 | 0.22 | M666_RS19060 | | imelysin family protein | 0.29 | M666_RS09010 | | RluA family pseudouridine synthase | low | > 67 |
Not shown: 2 genomes with orthologs for CSW01_06385 only; 79 genomes with orthologs for CSW01_03695 only