Conservation of cofitness between CSW01_09905 and CSW01_03630 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 1.0 CSW01_03630 sensor histidine kinase 0.58 10
Serratia liquefaciens MT49 0.75 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD 0.58 IAI46_23620 sensor histidine kinase low > 87
Rahnella sp. WP5 0.75 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD 0.54 EX31_RS00775 sensor histidine kinase low > 89
Dickeya dianthicola ME23 0.73 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD 0.57 DZA65_RS20935 sensor histidine kinase low > 75
Shewanella sp. ANA-3 0.73 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.57 Shewana3_2593 signal transduction histidine kinase, LytS (RefSeq) low > 73
Dickeya dianthicola 67-19 0.73 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD 0.57 HGI48_RS19860 sensor histidine kinase low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD 0.60 HER17_RS01480 sensor histidine kinase low > 75
Escherichia coli Nissle 1917 0.72 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD 0.56 ECOLIN_RS12455 two-component regulatory system sensor histidine kinase BtsS — —
Escherichia coli ECOR27 0.72 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 NOLOHH_15230 btsS two-component regulatory system sensor histidine kinase BtsS low > 76
Escherichia coli ECOR38 0.72 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 HEPCGN_02635 btsS two-component regulatory system sensor histidine kinase BtsS low > 88
Escherichia coli BW25113 0.72 b1805 fadD acyl-CoA synthase (NCBI) 0.56 b2126 yehU predicted sensory kinase in two-component system with YehT (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase 0.56 OHPLBJKB_01585 Sensor histidine kinase BtsS low > 74
Escherichia coli BL21 0.72 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 0.56 ECD_02055 inner membrane putative sensory kinase in two-component system with YehT low > 61
Escherichia coli ECRC62 0.72 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 BNILDI_14180 btsS two-component regulatory system sensor histidine kinase BtsS low > 75
Escherichia fergusonii Becca 0.72 EFB2_02195 Long-chain-fatty-acid--CoA ligase 0.56 EFB2_01730 Sensor histidine kinase BtsS low > 86
Escherichia coli ECRC98 0.72 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 JDDGAC_28000 btsS two-component regulatory system sensor histidine kinase BtsS low > 87
Escherichia coli ECRC101 0.72 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 MCAODC_21250 btsS two-component regulatory system sensor histidine kinase BtsS low > 87
Escherichia coli ECRC102 0.72 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 NIAGMN_21845 btsS two-component regulatory system sensor histidine kinase BtsS low > 80
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.55 EX28DRAFT_0436 Putative regulator of cell autolysis low > 76
Escherichia coli ECRC99 0.72 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 KEDOAH_04255 btsS two-component regulatory system sensor histidine kinase BtsS — —
Escherichia coli ECRC100 0.72 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD 0.56 OKFHMN_23910 btsS two-component regulatory system sensor histidine kinase BtsS low > 79
Klebsiella pneumoniae MKP103 0.71 KDGMDA_25120 long-chain-fatty-acid--CoA ligase FadD 0.54 KDGMDA_26490 sensor histidine kinase low > 95
Enterobacter sp. TBS_079 0.71 MPMX20_02711 Long-chain-fatty-acid--CoA ligase 0.55 MPMX20_03093 Sensor histidine kinase BtsS low > 85
Klebsiella michiganensis M5al 0.71 BWI76_RS17800 long-chain-fatty-acid--CoA ligase 0.55 BWI76_RS19475 signal transduction histidine kinase low > 92
Shewanella oneidensis MR-1 0.71 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) 0.58 SO2822 sensor histidine kinase (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.55 GFF3819 Autolysis histidine kinase LytS low > 78
Shewanella loihica PV-4 0.71 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) 0.57 Shew_2328 signal transduction histidine kinase, LytS (RefSeq) low > 60
Shewanella amazonensis SB2B 0.70 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) 0.58 Sama_1282 signal transduction histidine kinase, LytS (RefSeq) low > 62
Erwinia amylovora T8 0.70 OLJFJH_13100 long-chain-fatty-acid--CoA ligase FadD 0.50 OLJFJH_08010 sensor histidine kinase low > 58
Pantoea sp. MT58 0.70 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD 0.22 IAI47_05565 sensor histidine kinase low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS02670 long-chain-fatty-acid--CoA ligase FadD 0.22 PagCFBP13505_RS20115 sensor histidine kinase low > 74
Alteromonas macleodii MIT1002 0.61 MIT1002_02588 Long-chain-fatty-acid--CoA ligase 0.68 MIT1002_01190 Sensor histidine kinase YehU low > 70
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0256 AMP-dependent synthetase and ligase (RefSeq) 0.26 DvMF_1225 signal transduction histidine kinase, LytS (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU1453 fadD long-chain-fatty-acid--CoA ligase (TIGR) 0.30 DVU0597 lytS regulatory protein LytS (TIGR) low > 55
Azospirillum sp. SherDot2 0.30 MPMX19_02151 Long-chain-fatty-acid--CoA ligase 0.61 MPMX19_06240 Sensor histidine kinase BtsS low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS31155 AMP-dependent synthetase 0.59 AZOBR_RS22565 sensor histidine kinase low > 97
Rhodospirillum rubrum S1H 0.27 Rru_A1312 AMP-dependent synthetase and ligase (NCBI) 0.60 Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS (NCBI) low > 58

Not shown: 75 genomes with orthologs for CSW01_09905 only; 3 genomes with orthologs for CSW01_03630 only