Conservation of cofitness between CSW01_19345 and CSW01_03480 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19345 YccF domain-containing protein 1.0 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM 0.50 2
Shewanella oneidensis MR-1 0.64 SO1977 conserved hypothetical protein (NCBI ptt file) 0.29 SO0948 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.63 Shewana3_2470 hypothetical protein (RefSeq) 0.34 Shewana3_3333 methyltransferase small (RefSeq) low > 73
Shewanella amazonensis SB2B 0.63 Sama_1575 hypothetical protein (RefSeq) 0.31 Sama_2741 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.61 Shew_2148 hypothetical protein (RefSeq) 0.35 Shew_0768 methyltransferase small (RefSeq) low > 60
Serratia liquefaciens MT49 0.37 IAI46_08895 YccF domain-containing protein 0.30 IAI46_19595 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 86
Pectobacterium carotovorum WPP14 0.37 HER17_RS08440 YccF domain-containing protein 0.33 HER17_RS05770 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 75
Rahnella sp. WP5 0.36 EX31_RS18020 YccF domain-containing protein 0.32 EX31_RS21790 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 89
Klebsiella pneumoniae MKP103 0.34 KDGMDA_18220 YccF domain-containing protein 0.31 KDGMDA_28490 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 95
Erwinia amylovora T8 0.34 OLJFJH_15915 YccF domain-containing protein 0.32 OLJFJH_10205 SAM-dependent methyltransferase low > 58
Enterobacter sp. TBS_079 0.34 MPMX20_01611 Inner membrane protein YccF 0.31 MPMX20_03446 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 85
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS11245 YccF domain-containing protein 0.30 HMPREF1078_RS16180 methyltransferase low > 61
Erwinia tracheiphila SCR3 0.34 LU632_RS10045 YccF domain-containing protein 0.32 LU632_RS15435 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 74
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1982 Predicted membrane protein 0.31 EX28DRAFT_0070 Predicted O-methyltransferase low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS09990 hypothetical protein 0.30 BWI76_RS21365 tRNA (adenosine(37)-N6)-methyltransferase TrmM low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3252 Inner membrane protein YccF 0.28 GFF2105 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) low > 78
Dickeya dianthicola 67-19 0.32 HGI48_RS15300 YccF domain-containing protein 0.33 HGI48_RS15860 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS16125 YccF domain-containing protein 0.33 DZA65_RS16940 methyltransferase low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS15225 YccF domain-containing protein 0.31 DDA3937_RS15775 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 74
Escherichia coli BL21 0.31 ECD_00965 DUF307 family inner membrane protein 0.30 ECD_02469 tRNA1(Val) (adenine(37)-N6)-methyltransferase — —
Escherichia coli ECOR27 0.31 NOLOHH_21770 yccF YccF domain-containing protein 0.30 NOLOHH_13040 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02705 Inner membrane protein YccF 0.30 OHPLBJKB_01132 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 74
Escherichia coli BW25113 0.31 b0961 yccF conserved inner membrane protein (NCBI) 0.30 b2575 yfiC putative enzyme (VIMSS) low > 76
Escherichia coli ECOR38 0.31 HEPCGN_23305 yccF YccF domain-containing protein 0.30 HEPCGN_20510 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN 0.48 26
Escherichia coli Nissle 1917 0.31 ECOLIN_RS05050 YccF domain-containing protein 0.30 ECOLIN_RS14575 tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 55
Escherichia fergusonii Becca 0.31 EFB2_03110 Inner membrane protein YccF 0.30 EFB2_01321 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 86
Escherichia coli ECRC62 0.31 BNILDI_19935 yccF YccF domain-containing protein 0.30 BNILDI_11840 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 75
Escherichia coli ECRC98 0.31 JDDGAC_08825 yccF YccF domain-containing protein 0.30 JDDGAC_25030 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 87
Escherichia coli ECRC99 0.31 KEDOAH_22520 yccF YccF domain-containing protein 0.30 KEDOAH_06855 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Escherichia coli ECRC102 0.31 NIAGMN_02935 yccF YccF domain-containing protein 0.30 NIAGMN_19135 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN — —
Bacteroides ovatus ATCC 8483 0.31 BACOVA_05400 hypothetical protein 0.31 BACOVA_02572 methyltransferase domain protein low > 96
Escherichia coli ECRC101 0.31 MCAODC_24605 yccF YccF domain-containing protein 0.30 MCAODC_11895 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 88
Escherichia coli ECRC100 0.31 OKFHMN_05215 yccF YccF domain-containing protein 0.30 OKFHMN_21365 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN low > 79
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS13940 YccF domain-containing protein 0.30 HMPREF1181_RS14335 tRNA1(Val) (adenine(37)-N6)-methyltransferase 0.33 45
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS11505 YccF domain-containing protein 0.31 ABI39_RS16525 methyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS15540 YccF domain-containing protein 0.31 HMPREF1058_RS01205 methyltransferase low > 67
Pantoea agglomerans CFBP13505 P0401 0.29 PagCFBP13505_RS04705 YccF domain-containing protein 0.35 PagCFBP13505_RS14730 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 74
Pantoea sp. MT58 0.29 IAI47_12625 YccF domain-containing protein 0.33 IAI47_04840 tRNA1(Val) (adenine(37)-N6)-methyltransferase low > 76
Bacteroides thetaiotaomicron VPI-5482 0.28 BT4608 conserved hypothetical protein (NCBI ptt file) 0.32 BT0838 putative RNA methyltransferase (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS22945 hypothetical protein 0.28 CA265_RS05210 tRNA methyltransferase low > 88

Not shown: 10 genomes with orthologs for CSW01_19345 only; 6 genomes with orthologs for CSW01_03480 only