| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13600 | | superoxide dismutase | 1.0 | CSW01_03155 | | RNA polymerase-binding transcription factor DksA | 0.59 | 2 |
| Pseudomonas sp. BP01 | 0.49 | JOY50_RS11100 | | superoxide dismutase | 0.68 | JOY50_RS27695 | dksA | RNA polymerase-binding protein DksA | low | > 84 |
| Sphingomonas koreensis DSMZ 15582 | 0.48 | Ga0059261_0487 | | Superoxide dismutase | 0.32 | Ga0059261_0274 | | transcriptional regulator, TraR/DksA family | low | > 68 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_1086 | | Manganese superoxide dismutase (EC 1.15.1.1) | 0.68 | Pf1N1B4_2862 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Pseudomonas aeruginosa PA14 | 0.48 | IKLFDK_01740 | | Superoxide dismutase [Mn] | 0.70 | IKLFDK_30000 | | RNA polymerase-binding protein DksA | low | > 98 |
| Pseudomonas putida KT2440 | 0.48 | PP_0946 | | superoxide dismutase (Mn) | 0.64 | PP_4693 | | RNA polymerase-binding transcription factor DksA | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.48 | COO64_RS04255 | | superoxide dismutase | 0.67 | COO64_RS15070 | dksA | RNA polymerase-binding protein DksA | low | > 91 |
| Pseudomonas aeruginosa MRSN321 | 0.48 | PFGADD_04672 | sodA | Superoxide dismutase [Mn] | 0.70 | PFGADD_04947 | dksA | RNA polymerase-binding protein DksA | low | > 99 |
| Pseudomonas aeruginosa PUPa3 | 0.48 | NPBIFN_04731 | sodA | Superoxide dismutase [Mn] | 0.70 | NPBIFN_05024 | dksA | RNA polymerase-binding protein DksA | low | > 101 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_00167 | | Superoxide dismutase [Mn/Fe] | 0.68 | PFR28_03714 | | RNA polymerase-binding transcription factor DksA | low | > 88 |
| Pseudomonas sp. DMC3 | 0.48 | GFF1822 | | Superoxide dismutase [Mn/Fe] | 0.68 | GFF4034 | | RNA polymerase-binding transcription factor DksA | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_07065 | | superoxide dismutase | 0.68 | AO356_16095 | | molecular chaperone DnaK | low | > 104 |
| Pseudomonas protegens RBAN4 | 0.47 | FABNJH_04720 | | Superoxide dismutase | 0.69 | FABNJH_26620 | dksA | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_4152 | | Superoxide dismutase | 0.67 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_4152 | | Superoxide dismutase | 0.67 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS04370 | | superoxide dismutase | 0.67 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS04370 | | superoxide dismutase | 0.67 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.47 | QF045_RS07305 | | superoxide dismutase | 0.69 | QF045_RS26135 | | RNA polymerase-binding protein DksA | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.47 | GEMAOFIL_01069 | | Superoxide dismutase [Mn/Fe] | 0.69 | GEMAOFIL_04926 | | RNA polymerase-binding transcription factor DksA | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_5020 | | Manganese superoxide dismutase (EC 1.15.1.1) | 0.67 | PfGW456L13_1528 | | C4-type zinc finger protein, DksA/TraR family | low | > 87 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_04315 | | superoxide dismutase | 0.69 | PS417_23875 | | molecular chaperone DnaK | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.46 | PagCFBP13516_RS19030 | sodA | superoxide dismutase [Mn] | 0.85 | PagCFBP13516_RS15950 | dksA | RNA polymerase-binding protein DksA | — | — |
| Pantoea sp. MT58 | 0.46 | IAI47_18725 | | superoxide dismutase [Mn] | 0.85 | IAI47_15635 | | RNA polymerase-binding protein DksA | — | — |
| Erwinia amylovora T8 | 0.45 | OLJFJH_05035 | | superoxide dismutase [Mn] | 0.86 | OLJFJH_00765 | | RNA polymerase-binding protein DksA | — | — |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS00125 | sodA | superoxide dismutase [Mn] | 0.86 | LU632_RS20080 | dksA | RNA polymerase-binding protein DksA | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.44 | IJEDHG_09920 | sodA | superoxide dismutase [Mn] | 0.86 | IJEDHG_15060 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC101 | 0.44 | MCAODC_04370 | sodA | superoxide dismutase [Mn] | 0.86 | MCAODC_00860 | dksA | RNA polymerase-binding protein DksA | low | > 87 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_13870 | sodA | superoxide dismutase [Mn] | 0.86 | OKFHMN_10345 | dksA | RNA polymerase-binding protein DksA | low | > 79 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_06005 | sodA | superoxide dismutase [Mn] | 0.86 | NOLOHH_02690 | dksA | RNA polymerase-binding protein DksA | low | > 75 |
| Rahnella sp. WP5 | 0.44 | EX31_RS05785 | | superoxide dismutase [Mn] | 0.86 | EX31_RS03250 | | RNA polymerase-binding protein DksA | low | > 89 |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_11625 | sodA | superoxide dismutase [Mn] | 0.86 | NIAGMN_08195 | dksA | RNA polymerase-binding protein DksA | low | > 80 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_17495 | sodA | superoxide dismutase [Mn] | 0.86 | JDDGAC_13940 | dksA | RNA polymerase-binding protein DksA | low | > 87 |
| Escherichia coli ECRC62 | 0.44 | BNILDI_05520 | sodA | superoxide dismutase [Mn] | 0.86 | BNILDI_08980 | dksA | RNA polymerase-binding protein DksA | low | > 75 |
| Escherichia coli BL21 | 0.44 | ECD_03794 | | superoxide dismutase, Mn | 0.86 | ECD_00144 | | transcriptional regulator of rRNA transcription; DnaK suppressor protein | — | — |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_14285 | sodA | superoxide dismutase [Mn] | 0.86 | KEDOAH_17810 | dksA | RNA polymerase-binding protein DksA | — | — |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_04559 | | Superoxide dismutase [Mn] | 0.86 | MPMX20_00831 | | RNA polymerase-binding transcription factor DksA | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_04142 | | Superoxide dismutase [Mn] | 0.86 | OHPLBJKB_03517 | | RNA polymerase-binding transcription factor DksA | low | > 74 |
| Caulobacter crescentus NA1000 Δfur | 0.43 | CCNA_01855 | | iron/manganese superoxide dismutase | 0.34 | CCNA_02663 | | DnaK suppressor protein DksA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.43 | CCNA_01855 | | iron/manganese superoxide dismutase | 0.34 | CCNA_02663 | | DnaK suppressor protein DksA | low | > 66 |
| Escherichia coli BW25113 | 0.43 | b3908 | sodA | superoxide dismutase, manganese (VIMSS) | 0.86 | b0145 | dksA | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF2276 | | Manganese superoxide dismutase (EC 1.15.1.1) | 0.86 | GFF87 | | C4-type zinc finger protein, DksA/TraR family | low | > 78 |
| Escherichia fergusonii Becca | 0.43 | EFB2_04709 | | Superoxide dismutase [Mn] | 0.86 | EFB2_03899 | | RNA polymerase-binding transcription factor DksA | low | > 86 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_12515 | sodA | superoxide dismutase [Mn] | 0.86 | HEPCGN_08295 | dksA | RNA polymerase-binding protein DksA | low | > 88 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_4384 | | Superoxide dismutase | 0.86 | EX28DRAFT_3734 | | transcriptional regulator, TraR/DksA family | — | — |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS00705 | | superoxide dismutase | 0.84 | BWI76_RS05015 | | transcriptional regulator | — | — |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS20960 | | superoxide dismutase [Mn] | 0.86 | DDA3937_RS15935 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS00285 | | superoxide dismutase [Mn] | 0.85 | DZA65_RS17135 | | RNA polymerase-binding protein DksA | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS21110 | | superoxide dismutase [Mn] | 0.83 | HER17_RS05580 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola 67-19 | 0.41 | HGI48_RS00285 | | superoxide dismutase [Mn] | 0.85 | HGI48_RS16050 | | RNA polymerase-binding protein DksA | — | — |
| Serratia liquefaciens MT49 | 0.41 | IAI46_00200 | | superoxide dismutase [Mn] | 0.86 | IAI46_21210 | | RNA polymerase-binding protein DksA | — | — |
Not shown: 11 genomes with orthologs for CSW01_13600 only; 26 genomes with orthologs for CSW01_03155 only