| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13225 | | phosphoribulokinase | 1.0 | CSW01_02835 | | RNA polymerase sigma factor RpoS | 0.80 | 1 |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS22790 | | phosphoribulokinase | 0.69 | LU632_RS06480 | rpoS | RNA polymerase sigma factor RpoS | 0.53 | 69 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_23570 | | phosphoribulokinase | 0.70 | IAI46_03790 | | RNA polymerase sigma factor RpoS | low | > 87 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS25975 | | phosphoribulokinase | 0.70 | BWI76_RS22645 | | RNA polymerase sigma factor RpoS | 0.46 | 3 |
| Erwinia tracheiphila HP pepo 2.2 | 0.76 | IJEDHG_12125 | | phosphoribulokinase | 0.69 | IJEDHG_17500 | rpoS | RNA polymerase sigma factor RpoS | low | > 61 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_09050 | prkB | phosphoribulokinase | 0.70 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | low | > 76 |
| Rahnella sp. WP5 | 0.75 | EX31_RS04610 | | phosphoribulokinase | 0.70 | EX31_RS07825 | | RNA polymerase sigma factor RpoS | 0.59 | 10 |
| Klebsiella pneumoniae MKP103 | 0.75 | KDGMDA_06810 | | phosphoribulokinase | 0.70 | KDGMDA_03220 | | RNA polymerase sigma factor RpoS | low | > 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3714 | | Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown | 0.70 | GFF4788 | | RNA polymerase sigma factor RpoS | low | > 78 |
| Escherichia fergusonii Becca | 0.75 | EFB2_00467 | | Phosphoribulokinase, plasmid | 0.70 | EFB2_01169 | | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli BL21 | 0.75 | ECD_03206 | | putative phosphoribulokinase | 0.70 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | low | > 61 |
| Escherichia coli BW25113 | 0.75 | b3355 | prkB | predicted phosphoribulokinase (NCBI) | 0.70 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.75 | OHPLBJKB_00347 | | Phosphoribulokinase, plasmid | 0.70 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | low | > 74 |
| Escherichia coli ECRC62 | 0.75 | BNILDI_02470 | prkB | phosphoribulokinase | 0.70 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_16075 | prkB | phosphoribulokinase | 0.70 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | 0.46 | 3 |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_17250 | prkB | phosphoribulokinase | 0.70 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | low | > 79 |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_20880 | prkB | phosphoribulokinase | 0.70 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | 0.47 | 30 |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_15020 | prkB | phosphoribulokinase | 0.70 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | low | > 80 |
| Escherichia coli ECRC101 | 0.75 | MCAODC_07780 | prkB | phosphoribulokinase | 0.70 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Pantoea sp. MT58 | 0.75 | IAI47_01975 | | phosphoribulokinase | 0.71 | IAI47_04235 | | RNA polymerase sigma factor RpoS | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS01925 | | phosphoribulokinase | 0.68 | HER17_RS04350 | | RNA polymerase sigma factor RpoS | low | > 75 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_04258 | | Phosphoribulokinase, plasmid | 0.70 | MPMX20_03627 | | RNA polymerase sigma factor RpoS | low | > 85 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS19555 | | phosphoribulokinase | 0.68 | HGI48_RS16945 | | RNA polymerase sigma factor RpoS | low | > 71 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS19435 | | phosphoribulokinase | 0.69 | DDA3937_RS16875 | | RNA polymerase sigma factor RpoS | — | — |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS20640 | | phosphoribulokinase | 0.68 | DZA65_RS18020 | | RNA polymerase sigma factor RpoS | low | > 75 |
| Erwinia amylovora T8 | 0.74 | OLJFJH_04010 | | phosphoribulokinase | 0.70 | OLJFJH_09380 | | RNA polymerase sigma factor RpoS | low | > 58 |
| Enterobacter asburiae PDN3 | 0.74 | EX28DRAFT_4174 | | Phosphoribulokinase | 0.70 | EX28DRAFT_2837 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 76 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3400 | | phosphoribulokinase/uridine kinase (RefSeq) | 0.66 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_03965 | | Phosphoribulokinase, plasmid | 0.69 | MIT1002_00625 | | RNA polymerase sigma factor RpoS | low | > 70 |
| Shewanella oneidensis MR-1 | 0.70 | SO0878 | prkB | phosphoribulokinase (NCBI ptt file) | 0.66 | SO3432 | rpoS | RNA polymerase sigma-38 factor (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.70 | Shew_0587 | | phosphoribulokinase (RefSeq) | 0.68 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.68 | Sama_3002 | | phosphoribulokinase (RefSeq) | 0.68 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | low | > 62 |
| Dechlorosoma suillum PS | 0.57 | Dsui_1562 | | phosphoribulokinase | 0.44 | Dsui_1971 | | RNA polymerase sigma factor RpoS | low | > 51 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS34120 | | phosphoribulokinase | 0.38 | QEN71_RS22240 | | RNA polymerase sigma factor RpoS | low | > 153 |
| Marinobacter adhaerens HP15 | 0.54 | HP15_3311 | | phosphoribulokinase | 0.62 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | low | > 73 |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_005500 | | phosphoribulokinase | 0.38 | ABIE53_002057 | | RNA polymerase nonessential primary-like sigma factor | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_01313 | | phosphoribulokinase | 0.38 | H281DRAFT_00844 | | RNA polymerase, sigma 38 subunit, RpoS | — | — |
Not shown: 11 genomes with orthologs for CSW01_13225 only; 26 genomes with orthologs for CSW01_02835 only