Conservation of cofitness between CSW01_13810 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.92 18
Dickeya dadantii 3937 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli ECOR38 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia fergusonii Becca 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli ECRC62 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli BL21 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli BW25113 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECOR27 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Escherichia coli ECRC98 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC100 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli ECRC102 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC101 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli Nissle 1917 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia coli ECRC99 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Serratia liquefaciens MT49 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Dickeya dianthicola ME23 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.70 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.70 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Klebsiella pneumoniae MKP103 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Pectobacterium carotovorum WPP14 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB low > 75
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter sp. TBS_079 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Rahnella sp. WP5 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Erwinia tracheiphila HP pepo 2.2 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) 0.71 IJEDHG_08915 rhlB ATP-dependent RNA helicase RhlB — —
Erwinia amylovora T8 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB low > 58
Erwinia tracheiphila SCR3 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.71 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Pantoea sp. MT58 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.53 B158DRAFT_0413 Superfamily II DNA and RNA helicases low > 40
Shewanella amazonensis SB2B 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella loihica PV-4 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) 0.41 29
Shewanella sp. ANA-3 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB low > 70
Shewanella oneidensis MR-1 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.38 HP15_2099 DEAD/DEAH box helicase domain protein — —
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB — —
Pseudomonas sp. SVBP6 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB low > 93
Pseudomonas stutzeri RCH2 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 0.36 Psest_3166 Superfamily II DNA and RNA helicases low > 67
Pseudomonas sp. S08-1 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.35 OH686_17780 ATP-dependent RNA helicase RhlB low > 80

Not shown: 36 genomes with orthologs for CSW01_13810 only; 3 genomes with orthologs for CSW01_01555 only