Conservation of cofitness between CSW01_02530 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.84 19
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Escherichia fergusonii Becca 0.71 EFB2_00979 D-erythrose-4-phosphate dehydrogenase 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECRC99 0.70 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC102 0.70 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli ECRC98 0.70 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC62 0.70 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECOR38 0.70 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli BL21 0.70 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli BW25113 0.70 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECRC101 0.70 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Klebsiella michiganensis M5al 0.70 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Escherichia coli ECOR27 0.70 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Escherichia coli Nissle 1917 0.70 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB 0.71 16
Escherichia coli ECRC100 0.70 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Enterobacter sp. TBS_079 0.70 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Klebsiella pneumoniae MKP103 0.70 KDGMDA_04460 erythrose-4-phosphate dehydrogenase 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB 0.34 41
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS16015 erythrose-4-phosphate dehydrogenase 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Pectobacterium carotovorum WPP14 0.69 HER17_RS02685 erythrose-4-phosphate dehydrogenase 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB low > 75
Rahnella sp. WP5 0.69 EX31_RS21405 erythrose-4-phosphate dehydrogenase 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Pantoea sp. MT58 0.69 IAI47_03685 erythrose-4-phosphate dehydrogenase 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Dickeya dadantii 3937 0.68 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS19580 erythrose-4-phosphate dehydrogenase 0.70 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS18445 erythrose-4-phosphate dehydrogenase 0.70 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Erwinia amylovora T8 0.68 OLJFJH_08650 erythrose-4-phosphate dehydrogenase 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB low > 58
Serratia liquefaciens MT49 0.67 IAI46_21015 erythrose-4-phosphate dehydrogenase 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 87
Alteromonas macleodii MIT1002 0.67 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB — —
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_03375 epd erythrose-4-phosphate dehydrogenase 0.71 IJEDHG_08915 rhlB ATP-dependent RNA helicase RhlB — —
Erwinia tracheiphila SCR3 0.67 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase 0.71 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 73
Shewanella loihica PV-4 0.64 Shew_0753 erythrose 4-phosphate dehydrogenase (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella amazonensis SB2B 0.64 Sama_2758 erythrose 4-phosphate dehydrogenase (RefSeq) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO0931 epd D-erythrose-4-phosphate dehydrogenase (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.63 Shewana3_3352 erythrose 4-phosphate dehydrogenase (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Marinobacter adhaerens HP15 0.53 HP15_2912 glyceraldehyde 3-phosphate dehydrogenase, type I 0.38 HP15_2099 DEAD/DEAH box helicase domain protein — —
Pseudomonas putida KT2440 0.49 PP_4964 D-erythrose 4-phosphate dehydrogenase 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB — —
Pseudomonas stutzeri RCH2 0.48 Psest_0329 erythrose-4-phosphate dehydrogenase 0.36 Psest_3166 Superfamily II DNA and RNA helicases — —
Pseudomonas sp. SVBP6 0.48 COO64_RS17560 epd erythrose-4-phosphate dehydrogenase 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB — —
Pseudomonas sp. S08-1 0.48 OH686_10765 erythrose-4-phosphate dehydrogenase 0.35 OH686_17780 ATP-dependent RNA helicase RhlB — —
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0511 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12) 0.53 B158DRAFT_0413 Superfamily II DNA and RNA helicases — —
Acinetobacter radioresistens SK82 0.44 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase 0.35 MPMX26_01113 ATP-dependent RNA helicase RhlB low > 36
Acinetobacter baumannii LAC-4 0.44 RR41_RS10005 glyceraldehyde-3-phosphate dehydrogenase 0.37 RR41_RS06305 ATP-dependent RNA helicase RhlB — —

Not shown: 32 genomes with orthologs for CSW01_02530 only; 0 genomes with orthologs for CSW01_01555 only