Conservation of cofitness between CSW01_02450 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02450 pyrroline-5-carboxylate reductase 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.86 7
Serratia liquefaciens MT49 0.69 IAI46_21415 pyrroline-5-carboxylate reductase 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Pectobacterium carotovorum WPP14 0.69 HER17_RS03805 pyrroline-5-carboxylate reductase 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB — —
Dickeya dadantii 3937 0.68 DDA3937_RS17305 pyrroline-5-carboxylate reductase 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS17350 pyrroline-5-carboxylate reductase 0.70 HGI48_RS20225 ATP-dependent RNA helicase RhlB — —
Dickeya dianthicola ME23 0.67 DZA65_RS18440 pyrroline-5-carboxylate reductase 0.70 DZA65_RS21270 ATP-dependent RNA helicase RhlB — —
Rahnella sp. WP5 0.65 EX31_RS02690 pyrroline-5-carboxylate reductase 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Alteromonas macleodii MIT1002 0.60 MIT1002_03062 Pyrroline-5-carboxylate reductase 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB low > 70
Shewanella oneidensis MR-1 0.57 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella loihica PV-4 0.52 Shew_1136 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0197 pyrroline-5-carboxylate reductase 0.53 B158DRAFT_0413 Superfamily II DNA and RNA helicases low > 40
Marinobacter adhaerens HP15 0.38 HP15_287 pyrroline-5-carboxylate reductase 0.38 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Acinetobacter radioresistens SK82 0.38 MPMX26_00572 Pyrroline-5-carboxylate reductase 0.35 MPMX26_01113 ATP-dependent RNA helicase RhlB low > 36
Acinetobacter baumannii LAC-4 0.38 RR41_RS15925 pyrroline-5-carboxylate reductase 0.37 RR41_RS06305 ATP-dependent RNA helicase RhlB low > 55
Pseudomonas putida KT2440 0.37 PP_5095 pyrroline-5-carboxylate reductase 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS12995 proC pyrroline-5-carboxylate reductase 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB — —
Pseudomonas sp. S08-1 0.35 OH686_10980 pyrroline-5-carboxylate reductase 0.35 OH686_17780 ATP-dependent RNA helicase RhlB low > 80
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB — —
Pseudomonas stutzeri RCH2 0.34 Psest_0283 pyrroline-5-carboxylate reductase 0.36 Psest_3166 Superfamily II DNA and RNA helicases — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2585 pyrroline-5-carboxylate reductase 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Escherichia fergusonii Becca 0.27 EFB2_03670 Pyrroline-5-carboxylate reductase 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB 0.62 47
Klebsiella michiganensis M5al 0.27 BWI76_RS06170 pyrroline-5-carboxylate reductase 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB — —
Klebsiella pneumoniae MKP103 0.27 KDGMDA_14250 pyrroline-5-carboxylate reductase 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Enterobacter sp. TBS_079 0.27 MPMX20_00976 Pyrroline-5-carboxylate reductase 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Escherichia coli ECRC62 0.27 BNILDI_22950 proC pyrroline-5-carboxylate reductase 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli Nissle 1917 0.27 ECOLIN_RS02345 pyrroline-5-carboxylate reductase 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia coli ECOR27 0.27 NOLOHH_01535 proC pyrroline-5-carboxylate reductase 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Escherichia coli BW25113 0.27 b0386 proC pyrroline-5-carboxylate reductase (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli BL21 0.27 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli ECOR38 0.27 HEPCGN_07250 proC pyrroline-5-carboxylate reductase 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli ECRC98 0.27 JDDGAC_12265 proC pyrroline-5-carboxylate reductase 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB 0.42 53
Escherichia coli ECRC99 0.27 KEDOAH_19355 proC pyrroline-5-carboxylate reductase 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC102 0.27 NIAGMN_06665 proC pyrroline-5-carboxylate reductase 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC100 0.27 OKFHMN_08610 proC pyrroline-5-carboxylate reductase 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli ECRC101 0.27 MCAODC_27835 proC pyrroline-5-carboxylate reductase 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 88
Erwinia amylovora T8 0.26 OLJFJH_18285 pyrroline-5-carboxylate reductase 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Pantoea sp. MT58 0.26 IAI47_14945 pyrroline-5-carboxylate reductase 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Pantoea agglomerans CFBP13505 P0401 0.26 PagCFBP13505_RS10205 pyrroline-5-carboxylate reductase 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Erwinia tracheiphila HP pepo 2.2 0.23 IJEDHG_26195 proC pyrroline-5-carboxylate reductase 0.71 IJEDHG_08915 rhlB ATP-dependent RNA helicase RhlB — —
Erwinia tracheiphila SCR3 0.23 LU632_RS18995 proC pyrroline-5-carboxylate reductase 0.71 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74

Not shown: 74 genomes with orthologs for CSW01_02450 only; 0 genomes with orthologs for CSW01_01555 only