Conservation of cofitness between CSW01_13620 and CSW01_01355 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13620 aspartate ammonia-lyase 1.0 CSW01_01355 UDP-glucose 4-epimerase 0.73 3
Rahnella sp. WP5 0.77 EX31_RS08965 aspartate ammonia-lyase 0.10 EX31_RS18615 NAD(P)-dependent oxidoreductase low > 89
Escherichia coli ECRC102 0.75 NIAGMN_10275 aspA aspartate ammonia-lyase 0.16 NIAGMN_22345 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 80
Escherichia coli ECRC98 0.75 JDDGAC_16065 aspA aspartate ammonia-lyase 0.16 JDDGAC_28510 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 87
Escherichia coli ECOR27 0.75 NOLOHH_04695 aspA aspartate ammonia-lyase 0.17 NOLOHH_15730 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 76
Escherichia coli ECRC101 0.75 MCAODC_02940 aspA aspartate ammonia-lyase 0.16 MCAODC_20540 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 87
Escherichia coli ECRC99 0.75 KEDOAH_15735 aspA aspartate ammonia-lyase 0.16 KEDOAH_03750 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase — —
Escherichia coli ECRC100 0.75 OKFHMN_12430 aspA aspartate ammonia-lyase 0.16 OKFHMN_24400 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 79
Enterobacter asburiae PDN3 0.75 EX28DRAFT_3336 aspartate ammonia-lyase 0.30 EX28DRAFT_0516 Nucleoside-diphosphate-sugar epimerases low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_00419 Aspartate ammonia-lyase 0.10 MPMX20_01529 2-alkyl-3-oxoalkanoate reductase low > 85
Serratia liquefaciens MT49 0.75 IAI46_01480 aspartate ammonia-lyase 0.13 IAI46_15590 NAD-dependent epimerase/dehydratase family protein low > 87
Klebsiella michiganensis M5al 0.74 BWI76_RS02330 aspartate ammonia-lyase 0.09 BWI76_RS09540 hypothetical protein low > 92
Dickeya dadantii 3937 0.73 DDA3937_RS02720 aspartate ammonia-lyase 0.48 DDA3937_RS03415 NAD-dependent epimerase/dehydratase family protein low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS02695 aspartate ammonia-lyase 0.48 HGI48_RS03515 NAD-dependent epimerase/dehydratase family protein low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS02850 aspartate ammonia-lyase 0.48 DZA65_RS03630 NAD-dependent epimerase/dehydratase family protein low > 75
Azospirillum sp. SherDot2 0.53 MPMX19_03594 Aspartate ammonia-lyase 0.38 MPMX19_01806 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase — —
Pseudomonas sp. S08-1 0.52 OH686_13315 Aspartate ammonia-lyase 0.41 OH686_20905 UDP-glucose 4-epimerase — —
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS25420 aspA;go_function=aspartate aspartate ammonia-lyase 0.46 DY961_RS01185 SDR family oxidoreductase — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_26280 aspartate ammonia-lyase 0.50 IKLFDK_16015 NAD-dependent dehydratase low > 98
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS57875 aspA;go_function=aspartate aspartate ammonia-lyase 0.46 DQ20_RS34370 SDR family oxidoreductase low > 101
Pseudomonas sp. SVBP6 0.51 COO64_RS01760 aspA aspartate ammonia-lyase 0.45 COO64_RS06670 SDR family oxidoreductase low > 93
Pseudomonas putida KT2440 0.51 PP_5338 aspartate ammonia-lyase 0.47 PP_1803 UDP-sugar epimerase low > 96
Pseudomonas sp. BP01 0.51 JOY50_RS08810 aspA aspartate ammonia-lyase 0.36 JOY50_RS16060 SDR family oxidoreductase low > 84
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) 0.45 Pf1N1B4_339 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11090 aspartate ammonia-lyase 0.36 AO356_03355 hypothetical protein low > 104
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_00092 Aspartate ammonia-lyase 0.46 GEMAOFIL_01770 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase low > 96
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS33820 aspartate ammonia-lyase 0.32 QEN71_RS25600 SDR family oxidoreductase low > 153
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_5051 Aspartate ammonia-lyase 0.42 Psyr_3638 UDP-glucose 4-epimerase, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_5051 Aspartate ammonia-lyase 0.42 Psyr_3638 UDP-glucose 4-epimerase, putative low > 86
Pseudomonas segetis P6 0.51 MPMX49_00161 Aspartate ammonia-lyase 0.49 MPMX49_02886 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase low > 75
Pseudomonas orientalis W4I3 0.51 QF045_RS02490 aspartate ammonia-lyase 0.45 QF045_RS10945 NAD-dependent epimerase/dehydratase family protein low > 93
Bacteroides ovatus ATCC 8483 0.51 BACOVA_01069 aspartate ammonia-lyase 0.15 BACOVA_03732 UDP-N-acetylglucosamine 4-epimerase low > 96
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_09950 aspartate ammonia-lyase 0.48 AO353_01980 NAD-dependent dehydratase low > 101
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS20055 aspartate ammonia-lyase 0.10 ABI39_RS14805 NAD(P)-dependent oxidoreductase low > 72
Pseudomonas sp. DMC3 0.51 GFF488 Aspartate ammonia-lyase 0.46 GFF4665 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 89
Pseudomonas stutzeri RCH2 0.50 Psest_4074 Aspartate ammonia-lyase 0.44 Psest_1823 Nucleoside-diphosphate-sugar epimerases — —
Bacteroides thetaiotaomicron VPI-5482 0.50 BT2755 aspartate ammonia-lyase (NCBI ptt file) 0.14 BT2887 putative UDP-galactose 4-epimerase (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.49 HMPREF1181_RS11250 aspartate ammonia-lyase 0.11 HMPREF1181_RS01540 NAD(P)-dependent oxidoreductase — —
Shewanella amazonensis SB2B 0.45 Sama_0789 aspartate ammonia-lyase (RefSeq) 0.26 Sama_2249 hypothetical protein (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.44 ABCV34_RS07730 aspartate ammonia-lyase 0.32 ABCV34_RS13025 NAD-dependent epimerase/dehydratase family protein low > 48

Not shown: 31 genomes with orthologs for CSW01_13620 only; 28 genomes with orthologs for CSW01_01355 only