Conservation of cofitness between CSW01_12735 and CSW01_00460 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12735 RidA family protein 1.0 CSW01_00460 twin-arginine translocase subunit TatA 0.87 20
Escherichia coli ECRC62 0.81 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 BNILDI_05115 tatA Sec-independent protein translocase subunit TatA — —
Escherichia coli ECRC100 0.81 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 OKFHMN_14285 tatA Sec-independent protein translocase subunit TatA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase 0.62 OHPLBJKB_04215 Sec-independent protein translocase protein TatA low > 74
Escherichia coli ECRC102 0.81 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 NIAGMN_12040 tatA Sec-independent protein translocase subunit TatA low > 80
Escherichia coli BL21 0.81 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification 0.62 ECD_03729 TatABCE protein translocation system subunit low > 61
Escherichia coli ECRC98 0.81 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 JDDGAC_17910 tatA Sec-independent protein translocase subunit TatA low > 87
Escherichia coli Nissle 1917 0.81 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase 0.62 ECOLIN_RS22130 Sec-independent protein translocase subunit TatA low > 55
Escherichia fergusonii Becca 0.81 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase 0.62 EFB2_04779 Sec-independent protein translocase protein TatA low > 86
Escherichia coli ECRC101 0.81 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 MCAODC_04790 tatA Sec-independent protein translocase subunit TatA low > 87
Escherichia coli ECOR38 0.81 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 HEPCGN_12915 tatA Sec-independent protein translocase subunit TatA 0.41 88
Escherichia coli ECRC99 0.81 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 KEDOAH_13865 tatA Sec-independent protein translocase subunit TatA — —
Escherichia coli BW25113 0.81 b4243 yjgF orf, hypothetical protein (VIMSS) 0.62 b3836 b3836 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.81 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.62 NOLOHH_06415 tatA Sec-independent protein translocase subunit TatA low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.62 MPMX20_04444 Sec-independent protein translocase protein TatA low > 85
Pantoea sp. MT58 0.78 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.59 IAI47_18270 twin-arginine translocase TatA/TatE family subunit low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.60 EX28DRAFT_4501 twin arginine-targeting protein translocase, TatA/E family — —
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13516_RS17090 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.58 PagCFBP13516_RS18520 tatA Sec-independent protein translocase subunit TatA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF928 Endoribonuclease L-PSP 0.60 GFF263 Twin-arginine translocation protein TatA — —
Dickeya dianthicola ME23 0.75 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase 0.60 DZA65_RS00970 twin-arginine translocase subunit TatA low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase 0.60 HGI48_RS00910 Sec-independent protein translocase subunit TatA — —
Dickeya dadantii 3937 0.74 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase 0.62 DDA3937_RS20315 Sec-independent protein translocase subunit TatA low > 74
Rahnella sp. WP5 0.74 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase 0.43 EX31_RS14610 twin-arginine translocase subunit TatE low > 89
Erwinia amylovora T8 0.74 OLJFJH_07320 2-iminobutanoate/2-iminopropanoate deaminase 0.52 OLJFJH_06515 twin-arginine translocase subunit TatA low > 58
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_14050 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.57 IJEDHG_08635 Sec-independent protein translocase protein TatA — —
Erwinia tracheiphila SCR3 0.73 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.57 LU632_RS23990 tatA twin-arginine translocase TatA/TatE family subunit low > 73
Pectobacterium carotovorum WPP14 0.72 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase 0.58 HER17_RS20595 Sec-independent protein translocase subunit TatA low > 75
Serratia liquefaciens MT49 0.69 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.56 IAI46_01080 Sec-independent protein translocase subunit TatA low > 87
Lysobacter sp. OAE881 0.47 ABIE51_RS17260 RidA family protein 0.32 ABIE51_RS01275 Sec-independent protein translocase subunit TatA — —
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_0972 YjgF-like protein 0.32 Synpcc7942_0226 Sec-independent protein translocase TatA — —
Marinobacter adhaerens HP15 0.43 HP15_306 YjgF-like protein 0.53 HP15_3196 twin-arginine translocation protein TatA/E — —
Pseudomonas sp. BP01 0.42 JOY50_RS08980 RidA family protein 0.45 JOY50_RS11545 tatA twin-arginine translocase TatA/TatE family subunit low > 84
Acinetobacter baumannii LAC-4 0.42 RR41_RS01650 RidA family protein 0.41 RR41_RS16640 Sec-independent protein translocase subunit TatA low > 55
Shewanella sp. ANA-3 0.41 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) 0.54 Shewana3_3728 twin arginine-targeting protein translocase (RefSeq) low > 73
Shewanella loihica PV-4 0.41 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.56 Shew_3376 twin arginine-targeting protein translocase (RefSeq) — —
Acinetobacter radioresistens SK82 0.40 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase 0.44 MPMX26_00398 Sec-independent protein translocase protein TatA — —
Shewanella oneidensis MR-1 0.39 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) 0.55 SO4202 tatA Sec-independent protein translocase protein TatA (NCBI ptt file) — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS03565 Rid family detoxifying hydrolase 0.44 ABCV34_RS11270 Sec-independent protein translocase subunit TatA — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0573 endoribonuclease L-PSP, putative 0.32 B158DRAFT_0740 twin arginine-targeting protein translocase, TatA/E family low > 40
Alteromonas macleodii MIT1002 0.37 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.43 MIT1002_00506 Sec-independent protein translocase protein TatA — —

Not shown: 65 genomes with orthologs for CSW01_12735 only; 3 genomes with orthologs for CSW01_00460 only