Conservation of cofitness between CSW01_00050 and CSW01_00405 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00050 amino acid ABC transporter substrate-binding protein 1.0 CSW01_00405 EamA family transporter 0.43 19
Dickeya dianthicola ME23 0.35 DZA65_RS21155 amino acid ABC transporter substrate-binding protein 0.49 DZA65_RS00865 DMT family transporter low > 75
Dickeya dadantii 3937 0.35 DDA3937_RS19955 amino acid ABC transporter substrate-binding protein 0.48 DDA3937_RS22535 DMT family transporter low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS20110 transporter substrate-binding domain-containing protein 0.49 HGI48_RS00810 DMT family transporter low > 71
Pectobacterium carotovorum WPP14 0.34 HER17_RS01240 amino acid ABC transporter substrate-binding protein 0.51 HER17_RS20695 carboxylate/amino acid/amine transporter low > 75
Serratia liquefaciens MT49 0.33 IAI46_15770 cystine ABC transporter substrate-binding protein 0.53 IAI46_01025 DMT family transporter low > 87
Pseudomonas sp. S08-1 0.33 OH686_18905 L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY 0.45 OH686_12480 MadN protein low > 80
Klebsiella michiganensis M5al 0.32 BWI76_RS18365 cystine ABC transporter substrate-binding protein 0.48 BWI76_RS01270 hypothetical protein low > 92
Rahnella sp. WP5 0.32 EX31_RS09435 cystine ABC transporter substrate-binding protein 0.54 EX31_RS14725 DMT family transporter 0.38 34
Escherichia coli Nissle 1917 0.31 ECOLIN_RS10965 cystine ABC transporter substrate-binding protein 0.49 ECOLIN_RS26230 biotin transporter — —
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_00447 L-cystine-binding protein FliY 0.47 GEMAOFIL_04252 Biotin transporter low > 96
Escherichia coli BW25113 0.31 b1920 fliY cystine transporter subunit (NCBI) 0.49 b3827 yigM predicted inner membrane protein (NCBI) low > 76
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0627 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.52 EX28DRAFT_4492 Carboxylate/Amino Acid/Amine Transporter low > 76
Klebsiella pneumoniae MKP103 0.31 KDGMDA_25630 cystine ABC transporter substrate-binding protein 0.52 KDGMDA_09765 carboxylate/amino acid/amine transporter low > 95
Enterobacter sp. TBS_079 0.31 MPMX20_02845 L-cystine-binding protein FliY 0.53 MPMX20_04453 Biotin transporter low > 85
Pseudomonas fluorescens SBW25 0.31 PFLU_RS01215 cystine ABC transporter substrate-binding protein 0.45 PFLU_RS22205 EamA family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS01215 cystine ABC transporter substrate-binding protein 0.45 PFLU_RS22205 EamA family transporter low > 109
Pseudomonas orientalis W4I3 0.31 QF045_RS04240 cystine ABC transporter substrate-binding protein 0.47 QF045_RS22410 carboxylate/amino acid/amine transporter low > 93
Pantoea sp. MT58 0.30 IAI47_08175 cystine ABC transporter substrate-binding protein 0.51 IAI47_18325 DMT family transporter low > 76
Pseudomonas simiae WCS417 0.30 PS417_01105 cystine transporter subunit 0.45 PS417_20510 membrane protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 0.46 Psyr_3822 Protein of unknown function DUF6 low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 0.46 Psyr_3822 Protein of unknown function DUF6 low > 86
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS02070 cystine ABC transporter substrate-binding protein 0.51 PagCFBP13505_RS15305 DMT family transporter low > 74
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1693 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.47 Pf1N1B4_545 MadN protein low > 87
Pseudomonas putida KT2440 0.29 PP_0227 periplasmic cystine-binding protein 0.45 PP_4537 conserved membrane protein of unknown function low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS18445 tcyJ cystine ABC transporter substrate-binding protein 0.46 JOY50_RS01245 carboxylate/amino acid/amine transporter low > 84
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3919 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.47 Pf6N2E2_2678 MadN protein low > 103
Pseudomonas sp. DMC3 0.28 GFF4198 L-cystine-binding protein FliY 0.47 GFF2353 Biotin transporter low > 89
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_10235 cystine transporter subunit 0.46 AO356_04220 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_444 Cystine ABC transporter, periplasmic cystine-binding protein FliY 0.47 PfGW456L13_4455 MadN protein low > 87
Pseudomonas sp. RS175 0.27 PFR28_04855 L-cystine-binding protein FliY 0.45 PFR28_00752 Biotin transporter low > 88
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_11675 cystine transporter subunit 0.47 AO353_18295 hypothetical protein low > 101
Pseudomonas aeruginosa PA14 0.24 IKLFDK_23875 cystine ABC transporter substrate-binding protein 0.46 IKLFDK_17830 carboxylate/amino acid/amine transporter low > 98
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS37765 cystine ABC transporter substrate-binding protein 0.46 DQ20_RS41520 carboxylate/amino acid/amine transporter low > 101
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS21525 cystine ABC transporter substrate-binding protein 0.46 DY961_RS15545 carboxylate/amino acid/amine transporter low > 100
Pseudomonas sp. SVBP6 0.23 COO64_RS00800 tcyJ cystine ABC transporter substrate-binding protein 0.47 COO64_RS21940 carboxylate/amino acid/amine transporter low > 93

Not shown: 28 genomes with orthologs for CSW01_00050 only; 16 genomes with orthologs for CSW01_00405 only